1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
...ttcgcttctccatccaaatttgtgctgattgtcatatgtttattatggatggattttgctagcctgtactaattattatgcattggttcttatgtaatagGTTATTGCACTGTACGTCACGGGGGCACTTAACACTGTTCTAACTCCAGCCCACCAGAGTGAAATGCGCCGGTACCTTTACAATCATCAG
species | Physcomitrella patens |
transcript | PP1S33_211V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GACACTGGCCGGGTGACTACGGGGGTCCCATGTTCCTCATGCCTGGACTG GTTATTGCACTGTACGTCACGGGGGCACTTAACACTGTTCTAACTCCAGCCEST: gi|100361183|gb|BY946955.1|BY946955
genomic: GACACTGGCCGGGTGACTACGGGGGTCCCATGTTCCTCATGCCTGGACTGgtaatcattt ... tatgtaatagGTTATTGCACTGTACGTCACGGGGGCACTTAACACTGTTCTAACTCCAGCC
EST: GACACTGGCCGGGTGACTACGGGGGTCCCATGTTCCTCATGCCTGGACTG GTTATTGCACTGTACGTCACGGGGGCACTTAACACTGTTCTAACTCCAGCCEST: gi|100441769|gb|BY962860.1|BY962860
genomic: GACACTGGCCGGGTGACTACGGGGGTCCCATGTTCCTCATGCCTGGACTGgtaatcattt ... tatgtaatagGTTATTGCACTGTACGTCACGGGGGCACTTAACACTGTTCTAACTCCAGCC
EST: GACACTGGCCGGGTGACTACGGGGGTCCCATGTTCCTCATGCCTGGACTG GTTATTGCACTGTACGTCACGGGGGCACTTAACACTGTTCTAACTCCAGCC
genomic: GACACTGGCCGGGTGACTACGGGGGTCCCATGTTCCTCATGCCTGGACTGgtaatcattt ... tatgtaatagGTTATTGCACTGTACGTCACGGGGGCACTTAACACTGTTCTAACTCCAGCC
tggatggattttgctagcctgtactaattattatgcattggttcttatgtaatagGTTATTGCACTGTACGTCACGGGGGCACTTAACACTGTTCTAACTCCAGCCCACCAGAGTGAAATGCGCCGGTACCTTTACAATCATCAG
tactaat putative branch site (score: 4)
ttcttat putative PPT
tgtactaattattat TA-rich tract