1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
...caaaatggcagccagctaggtgtcgtcgctttcattttctatcatatactggtgatttcctttggttttaatttaccagataatgcactgcttacaccagAAACTGTTAAGTAGCGGATCAGGAGCACTTACAAAATTTTCCGCTGCAACAAACCGAGACCCGTTTTATCTCCATACTTCAACGACTGTACCACGCCTAC
species | Physcomitrella patens |
transcript | PP1S79_115V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: ACCCATAATTTGGCGACGGGTATTTGCGTGTGGAGTCGGGTGCCATGGAG AAACTGTTAAGTAGCGGATCAGGAGCACTTACAAAATTTTCCGCTGCAACAEST: gi|18369566|gb|BJ201654.1|BJ201654
genomic: ACCCATAATTTGGCGACGGGTATTTGCGTGTGGAGTCGGGTGCCATGGAGgtaagtcgtg ... cttacaccagAAACTGTTAAGTAGCGGATCAGGAGCACTTACAAAATTTTCCGCTGCAACA
EST: ACCCATAATTTGGCGACGGGTATTTGCGTGTGGAGTCGGGTGCCATGGAG AAACTGTTAAGTAGCGGATCAGGAGCACTTACAAAATTTTCCGCTGCAACAEST: gi|18365242|gb|BJ197316.1|BJ197316
genomic: ACCCATAATTTGGCGACGGGTATTTGCGTGTGGAGTCGGGTGCCATGGAGgtaagtcgtg ... cttacaccagAAACTGTTAAGTAGCGGATCAGGAGCACTTACAAAATTTTCCGCTGCAACA
EST: ACCCATAATTTGGCGACGGGTATTTGCGTGTGGAGTCGGGTGCCATGGAG AAACTGTTAAGTAGCGGATCAGGAGCACTTACAAAATTTTCCGCTGCAACA
genomic: ACCCATAATTTGGCGACGGGTATTTGCGTGTGGAGTCGGGTGCCATGGAGgtaagtcgtg ... cttacaccagAAACTGTTAAGTAGCGGATCAGGAGCACTTACAAAATTTTCCGCTGCAACA
atactggtgatttcctttggttttaatttaccagataatgcactgcttacaccagAAACTGTTAAGTAGCGGATCAGGAGCACTTACAAAATTTTCCGCTGCAACAAACCGAGACCCGTTTTATCTCCATACTTCAACGACTGTACCACGCCTAC
tgcttac putative branch site (score: 3)
tttggttttaattta TA-rich tract