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gtttgtgttgctctcgatggaacatcgtgttttgtttaagagtaatttatttatttgtttgtttgttggattttttggtgcatagcaattcctagcagaattaaatcgctttcatcagctgaaattcttttttctgaggctttcgtatgtaaatatatttaagaaagagtcttactacctcacagGGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAGGGCGATCCATTCACCTTCACAATTAAGCGCGGCGTGGGAACCGATACCT
species | Physcomitrella patens |
transcript | PP1S318_21V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAG GGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAGEST: gi|208387754|gb|DC941323.1|DC941323
genomic: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAGgtttgtgttg ... tacctcacagGGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAG
EST: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAG GGTCCAGANGTTAAAAGTGGAGACCTGCCTCA-CCNATTATGCTGAAAAAGEST: gi|162154587|gb|FC330797.1|FC330797
genomic: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAGgtttgtgttg ... tacctcacagGGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAG
EST: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAG GGTCCAGAGGTTAGAAGTGGAGAEST: gi|100359954|gb|BY947205.1|BY947205
genomic: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAGgtttgtgttg ... tacctcacagGGTCCAGAGGTTAGAAGTGGAGA
EST: CA-CAAAGAAGCGCACGCGAATGTCATTGCTCTCATNGT-GGATACAAAG GGTCCAGAAGGT-AGAAGTGGAGACCTGCCTCAGCCAATTATGCTNGA-GAEST: gi|100386829|gb|BY988098.1|BY988098
genomic: CAACAAAGAAGCGCACGCGAATGTCATTGCTCTCAT-GTTGGATACAAAGgtttgtgttg ... tacctcacagGGTCCAGA-GGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCT-GAAGA
EST: CAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGT-GGNATACAAAG GGTCCAGAGGTTAGAAGEST: gi|162202022|gb|FC377228.1|FC377228
genomic: CAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGG-ATACAAAGgtttgtgttg ... tacctcacagGGTCCAGAGGTTAGAAG
EST: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAG GGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAGEST: gi|162155347|gb|FC331246.1|FC331246
genomic: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAGgtttgtgttg ... tacctcacagGGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAG
EST: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAG GGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAGEST: gi|208398035|gb|DC908207.1|DC908207
genomic: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAGgtttgtgttg ... tacctcacagGGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAG
EST: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAG GGTCCAGAGGTTANAAGTGGANACCTGCCTCANCCAATTATGCTGAAAAANEST: gi|162158981|gb|FC334828.1|FC334828
genomic: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAGgtttgtgttg ... tacctcacagGGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAG
EST: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAG GGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAGEST: gi|162256310|gb|FC432320.1|FC432320
genomic: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAGgtttgtgttg ... tacctcacagGGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAG
EST: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAG GGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAGEST: gi|162267890|gb|FC444491.1|FC444491
genomic: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAGgtttgtgttg ... tacctcacagGGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAG
EST: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAG GGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAGEST: gi|100388218|gb|BY951820.1|BY951820
genomic: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAGgtttgtgttg ... tacctcacagGGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAG
EST: TCA-CAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGAATACAAAG GGTCCAGAGGTTAGAAGTGGAGACCTGCTTCAGCCAATTATGCTGAGGAAGEST: gi|100390194|gb|BY952602.1|BY952602
genomic: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAGgtttgtgttg ... tacctcacagGGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAG
EST: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAG GGTCCCGAGGTTAGAAGTGGEST: gi|100398109|gb|BY954092.1|BY954092
genomic: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAGgtttgtgttg ... tacctcacagGGTCCAGAGGTTAGAAGTGG
EST: TCAACAAAGA-GCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAG GGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAGEST: gi|100369821|gb|BY967400.1|BY967400
genomic: -CAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAGgtttgtgttg ... tacctcacagGGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAG
EST: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAG GGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAGEST: gi|100379690|gb|BY949895.1|BY949895
genomic: TCAACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAGgtttgtgttg ... tacctcacagGGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAG
EST: CNNACAA-GAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAG GGTC-AGAAGGT-AGAAGTGGAGACCTGCCTCAGCCNAAT-ATGCTGAAGA
genomic: CA-ACAAAGAAGCGCACGCGAATGTCATTGCTCTCATGTTGGATACAAAGgtttgtgttg ... tacctcacagGGTCCAGA-GGTTAGAAGTGGAGACCTGCCTCAGCC-AATTATGCTGAAGA
tttctgaggctttcgtatgtaaatatatttaagaaagagtcttactacctcacagGGTCCAGAGGTTAGAAGTGGAGACCTGCCTCAGCCAATTATGCTGAAGAAGGGCGATCCATTCACCTTCACAATTAAGCGCGGCGTGGGAACCGATACCT
gtcttac putative branch site (score: 9)
tcttact CT-rich tract
tatgtaaatatattta TA-rich tract