1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtaactggaagaactttgaaacttcgttctgggtggtttcttctagatttgtttgttatagtctccacctcaaaagcggataatgctaagctttgttctcacaaactcctgtttgctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGCCCGACGGAAAACAGTGACTGAGAAGGACTTCCTTGATGCTGTAAACAA
species | Oryza sativa |
transcript | LOC_Os02g54340.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|29622230|gb|CB627241.1|CB627241
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|86846539|gb|CI280856.1|CI280856
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|86427651|gb|CI072748.1|CI072748
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88993079|gb|CI108707.1|CI108707
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|33811457|gb|CF331617.1|CF331617
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|66912920|gb|CX099768.1|CX099768
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88991224|gb|CI108611.1|CI108611
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88506200|gb|CI433706.1|CI433706
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88218140|gb|CI217989.1|CI217989
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88515458|gb|CI443112.1|CI443112
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88848783|gb|CI087305.1|CI087305
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|86540292|gb|CI180498.1|CI180498
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88971579|gb|CI017893.1|CI017893
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|86540330|gb|CI180536.1|CI180536
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|86848818|gb|CI295658.1|CI295658
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|58673769|gb|CK062455.1|CK062455
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88982623|gb|CI028036.1|CI028036
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88518037|gb|CI445590.1|CI445590
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88905760|gb|CI002098.1|CI002098
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88518123|gb|CI445777.1|CI445777
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88980874|gb|CI021004.1|CI021004
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|15856297|gb|BI809109.1|BI809109
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|89196234|gb|CI397236.1|CI397236
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: CGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAAGCTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCEST: gi|86873335|gb|CI341560.1|CI341560
genomic: CGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAA-CTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGC
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|86490075|gb|CI132708.1|CI132708
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88474442|gb|CI411713.1|CI411713
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|86427640|gb|CI072737.1|CI072737
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88974022|gb|CI002684.1|CI002684
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|86540282|gb|CI180488.1|CI180488
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|86415012|gb|CI069415.1|CI069415
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|86593357|gb|CI257997.1|CI257997
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|55436033|gb|CV731154.1|CV731154
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|313080019|gb|HO213339.1|HO213339
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88474149|gb|CI411420.1|CI411420
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|86526803|gb|CI167009.1|CI167009
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|25803583|gb|CA759544.1|CA759544
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88504294|gb|CI431800.1|CI431800
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|86541373|gb|CI181579.1|CI181579
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|86536399|gb|CI176605.1|CI176605
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88507099|gb|CI434605.1|CI434605
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|86540331|gb|CI180537.1|CI180537
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|89194700|gb|CI117137.1|CI117137
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGEST: gi|88974008|gb|CI002670.1|CI002670
genomic: GCGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCG
EST: CGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTCAAACTG GAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGC
genomic: CGCGATATCCGTTTCGAGCTGCTGGCTCGCCTCTGCCCCAACTC-AACTGgtaactggaa ... gctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGC
tcaaaagcggataatgctaagctttgttctcacaaactcctgtttgctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGCCCGACGGAAAACAGTGACTGAGAAGGACTTCCTTGATGCTGTAAACAA
ttctcac putative branch site (score: 34)
ataat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaactggaagaactttgaaacttcgttctgggtggtttcttctagatttgtttgttatagtctccacctcaaaagcggataatgctaagctttgttctcacaaactcctgtttgctgttacagGAGCTGATATAAGGAGTGTCTGCACAGAAGCTGGCATGTATGCGATTCGCGCCCGACGGAAAACAGTGACTGAGAAGGACTTCCTTGATGCTGTAAACAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG