1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtagtacatttttgcacatttgcacctactatttattcaaatcttggtttatgtatccaggctatgattgtgtatctgactaatcttttcaggtgacatatataactggtgtaatatttttttgatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTTGAGGCTGCCGGAATATG
species | Oryza sativa |
transcript | LOC_Os01g46610.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GGTTCA-GGATATTTTCCAGGAGGTCTATGAAGCTGEST: gi|58665596|gb|CK054282.1|CK054282
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagG-TTCAAGGATATTTTCCAGGAGGTCTATGAAGCTG
EST: CAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|58681851|gb|CK070538.1|CK070538
genomic: CAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|58685196|gb|CK073883.1|CK073883
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAEST: gi|29643695|gb|CB648702.1|CB648702
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGA
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGEST: gi|58586908|gb|CF985216.1|CF985216
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAG
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|55408933|gb|CV721309.1|CV721309
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: GCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|58601771|gb|CK012299.1|CK012299
genomic: GCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|22546869|gb|BU099180.1|BU099180
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTNEST: gi|29681045|gb|CB677320.1|CB677320
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTEST: gi|2310583|gb|C26738.1|C26738
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|33796466|gb|CF324100.1|CF324100
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|58591977|gb|CF990285.1|CF990285
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|163925810|gb|EG714934.1|EG714934
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|58668052|gb|CK056738.1|CK056738
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAACTATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|33676653|gb|CF304892.1|CF304892
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|33795162|gb|CF323454.1|CF323454
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|58678891|gb|CK067578.1|CK067578
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|29612963|gb|CB617976.1|CB617976
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|33676140|gb|CF304379.1|CF304379
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|58600685|gb|CK011213.1|CK011213
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|27576994|gb|CA999688.1|CA999688
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|29612961|gb|CB617974.1|CB617974
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAEST: gi|58587829|gb|CF986137.1|CF986137
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAA
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|58682904|gb|CK071591.1|CK071591
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|109974759|gb|DT807089.1|DT807089
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|29663182|gb|CB659457.1|CB659457
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGATATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|33796234|gb|CF323983.1|CF323983
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATNGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTEST: gi|29671744|gb|CB668019.1|CB668019
genomic: CGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATAT-GATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTEST: gi|58662619|gb|CK051305.1|CK051305
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|58601500|gb|CK012028.1|CK012028
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|58675276|gb|CK063963.1|CK063963
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|33676517|gb|CF304756.1|CF304756
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|33676366|gb|CF304605.1|CF304605
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|426263|gb|D22124.1|D22124
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|58681694|gb|CK070381.1|CK070381
genomic: CTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|11442840|gb|BF430739.1|BF430739
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|33676128|gb|CF304367.1|CF304367
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|29674012|gb|CB670287.1|CB670287
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GGTTCA-GGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTEST: gi|163927556|gb|EG709964.1|EG709964
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagG-TTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|27577341|gb|CB000036.1|CB000036
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|117251413|gb|CT844156.1|CT844156
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|88743066|gb|CI766574.1|CI766574
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|33680077|gb|CF308316.1|CF308316
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTEST: gi|58681524|gb|CK070211.1|CK070211
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
EST: CCGGTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGEST: gi|29642812|gb|CB647819.1|CB647819
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAG
EST: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAG GTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
genomic: CCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGATGGAAGgtagtacatt ... gatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTT
actaatcttttcaggtgacatatataactggtgtaatatttttttgatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTTGAGGCTGCCGGAATATG
tttttttg CT-rich tract
taatatttttttgatg TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtagtacatttttgcacatttgcacctactatttattcaaatcttggtttatgtatccaggctatgattgtgtatctgactaatcttttcaggtgacatatataactggtgtaatatttttttgatgatgcagGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTTGAGGCTGCCGGAATATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA