1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...atatatgtacttctgcacacaatttcaaacagactctactttggaatatgattgaatggactaaacaccatttacacaattctatgtattcaaaattcagGAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAATGTGAAAATGCACTCTACAAAGTCGATACG
species | Oryza sativa |
transcript | LOC_Os12g15470.2 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: TTGTGCCATTTGCTCATGGAATGGCTCTAATTTCAGACGATATATACCAG GAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAAEST: gi|117240321|gb|CT842747.1|CT842747
genomic: TTGTGCCATTTGCTCATGGAATGGCTCTAATTTCAGACGATATATACCAGgtaagtccac ... caaaattcagGAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAA
EST: TTGTGCCATTTGCTCATGGAATGGCTCTAATTTCAGACGATATATACCAG GAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAAEST: gi|29659836|gb|CB656111.1|CB656111
genomic: TTGTGCCATTTGCTCATGGAATGGCTCTAATTTCAGACGATATATACCAGgtaagtccac ... caaaattcagGAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAA
EST: TTGTGCCATTTGCTCATGGAATGGCTCTAATTTCAGACGATATATACCAG GAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAAEST: gi|33684071|gb|CF312310.1|CF312310
genomic: TTGTGCCATTTGCTCATGGAATGGCTCTAATTTCAGACGATATATACCAGgtaagtccac ... caaaattcagGAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAA
EST: TCAGACGATATATACCAG GAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAAEST: gi|29668081|gb|CB664356.1|CB664356
genomic: TCAGACGATATATACCAGgtaagtccac ... caaaattcagGAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAA
EST: TTGTGCCATTTGCTCATGGAATGGCTCTAATTTCAGACGATATATACCAG GAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAAEST: gi|29661783|gb|CB658058.1|CB658058
genomic: TTGTGCCATTTGCTCATGGAATGGCTCTAATTTCAGACGATATATACCAGgtaagtccac ... caaaattcagGAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAA
EST: TTGTGCCATTTGCTCATGGAATGGCTCTAATTTCAGACGATATATACCAG GAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAAEST: gi|33801783|gb|CF326764.1|CF326764
genomic: TTGTGCCATTTGCTCATGGAATGGCTCTAATTTCAGACGATATATACCAGgtaagtccac ... caaaattcagGAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAA
EST: TTGTGCCATTTGCTCATGGAATGGCTCTAATTTCAGACGATATATACCAG GAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAAEST: gi|88399116|gb|CI603783.1|CI603783
genomic: TTGTGCCATTTGCTCATGGAATGGCTCTAATTTCAGACGATATATACCAGgtaagtccac ... caaaattcagGAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAA
EST: TTGTGCCATTTGCTCATGGAATGGCTCTAATTTCAGACGATATATACCAG GAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAAEST: gi|86905526|gb|CI285489.1|CI285489
genomic: TTGTGCCATTTGCTCATGGAATGGCTCTAATTTCAGACGATATATACCAGgtaagtccac ... caaaattcagGAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAA
EST: TTGTGCCATTTGCTCATGGAATGGCTCTAATTTCAGACGATATATACCAG GAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAAEST: gi|4715276|gb|AU056393.1|AU056393
genomic: TTGTGCCATTTGCTCATGGAATGGCTCTAATTTCAGACGATATATACCAGgtaagtccac ... caaaattcagGAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAA
EST: TGTGCCATTTGCTCATGGGAATGGCTCTAATTTCAGACGATATATACCAG GGAAGCTCAGACTGCATGCCACGGGNAACTACTGGAATACTACCACTGGAT
genomic: TGTGCCATTTGCTCATGG-AATGGCTCTAATTTCAGACGATATATACCAGgtaagtccac ... caaaattcagG-AAGCTCAGACTGCATGCCACGGA-AACTACTGGAATACTACCACTG-AT
atatgattgaatggactaaacaccatttacacaattctatgtattcaaaattcagGAAGCTCAGACTGCATGCCACGGAAACTACTGGAATACTACCACTGATAAATGTGAAAATGCACTCTACAAAGTCGATACG
gactaaa putative branch site (score: 2)
tatgtattcaaaatt TA-rich tract