1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaattcggtcactgccattctaatcatcctttatcatgcttgttgaatcaataccaaaattatggatgaaaacttgtaccaatgaactagattgatctgatgaacctctccgttgcgcagGTGTTCGGATCAAGCACCTTCATAGGGCTTGGGATAGTGTTCTTCTCAGGAGTCTGCTTCTCACTCTTCTCCCCGGCATTCAACCTCGCCACCAATGACC
species | Oryza sativa |
transcript | LOC_Os12g31850.3 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: CAGGAACTGCGGAATACTTGATCGAGCTCGAAGAACGGCGTTCGATCAAG GTGTTCGGATCAAGCACCTTCATAGGGCTTGGGATAGTGTTCTTCTCANGAEST: gi|11025713|gb|AU162314.1|AU162314
genomic: CAGGAACTGCGGAATACTTGATTGAGCTCGAAGAACGGCGTTCGATCAAGgtaattcggt ... cgttgcgcagGTGTTCGGATCAAGCACCTTCATAGGGCTTGGGATAGTGTTCTTCTCAGGA
EST: AGGAACTNG-GNAATACTTGATTGAGCTCGAAGAACGGCGTTCGATCAAG GTGTTCGGATCAAGCACCTTCATAGGGCTTGGGATAGTGTTCTTCTCAGGAEST: gi|218501335|gb|FG958585.1|FG958585
genomic: AGGAACT-GCGGAATACTTGATTGAGCTCGAAGAACGGCGTTCGATCAAGgtaattcggt ... cgttgcgcagGTGTTCGGATCAAGCACCTTCATAGGGCTTGGGATAGTGTTCTTCTCAGGA
EST: CAGGAACTGCGGAATACTTGATTGAGCTCGAAGAACGGCGTTCGATCAAG GTGTTCGGATCAAGCACCTTCATAGGGCTTGGGATAGTGTTCTTCTCAGGAEST: gi|29644126|gb|CB649133.1|CB649133
genomic: CAGGAACTGCGGAATACTTGATTGAGCTCGAAGAACGGCGTTCGATCAAGgtaattcggt ... cgttgcgcagGTGTTCGGATCAAGCACCTTCATAGGGCTTGGGATAGTGTTCTTCTCAGGA
EST: CAGGAACTGCGGAATACTTGATTGAGCTCGAAGAACGGCGTTCGATCAAG GTGTTCGGATCAAGCACCTTCATAGGGCTTGGGATAGTGTTCTTCTCAGGAEST: gi|29665274|gb|CB661549.1|CB661549
genomic: CAGGAACTGCGGAATACTTGATTGAGCTCGAAGAACGGCGTTCGATCAAGgtaattcggt ... cgttgcgcagGTGTTCGGATCAAGCACCTTCATAGGGCTTGGGATAGTGTTCTTCTCAGGA
EST: CAGGAACTGCGGAATACTTGATTGAGCTCGAAGAACGGCGTTCGATCAAG GTGTTCGGATCAAGCACCTTCATAGGGCTTGGGATAGTGTTCTTCTCAGGAEST: gi|218483875|gb|FG965316.1|FG965316
genomic: CAGGAACTGCGGAATACTTGATTGAGCTCGAAGAACGGCGTTCGATCAAGgtaattcggt ... cgttgcgcagGTGTTCGGATCAAGCACCTTCATAGGGCTTGGGATAGTGTTCTTCTCAGGA
EST: CAGGAACTGCGGAATACTTGATCGAGCTCGAAGAACGGCGTTCGATCAAG GTGTTCGGATCAAGCACCTTCATAGGGCTTGGGATAGTGTTCTTCTCAGGA
genomic: CAGGAACTGCGGAATACTTGATTGAGCTCGAAGAACGGCGTTCGATCAAGgtaattcggt ... cgttgcgcagGTGTTCGGATCAAGCACCTTCATAGGGCTTGGGATAGTGTTCTTCTCAGGA
atgaaaacttgtaccaatgaactagattgatctgatgaacctctccgttgcgcagGTGTTCGGATCAAGCACCTTCATAGGGCTTGGGATAGTGTTCTTCTCAGGAGTCTGCTTCTCACTCTTCTCCCCGGCATTCAACCTCGCCACCAATGACC
atctgat putative branch site (score: 4)
cctctccgtt putative PPT