1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtttgttctgtctggactgctgttatcttttcttgtgattatctggtagtaactgttctttttctgtccctaatagGTACCCTTAGATTGCAGCAGGACAAAAGAGCAGTGCTGCTGTATTTGTAGTACTGGTTCTTACCTGGCAAGTAATCCCCCTTGCATTCATAAG
species | Oryza sativa |
transcript | LOC_Os02g48340.3 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TCAGACCAAAGAGCAAGCTGAACTATGCTGCCAAACATTTGTACCTTGAG GTACCCTTAGATTGCAGCAGGACAAAAGAGCAGTGCTGCTGTATTTGTAGTEST: gi|29645024|gb|CB650031.1|CB650031
genomic: TCAGACCAAAGAGCAAGCTGAACTATGCTGCCAAACATTTGTACCTTGAGgtttgttctg ... tccctaatagGTACCCTTAGATTGCAGCAGGACAAAAGAGCAGTGCTGCTGTATTTGTAGT
EST: TCAGACCAAAGAGCAAGCTGAACTATGCTGCCAAACATTTGTACCTTGAG GTACCCTTAGATTGCAGCAGGACAAAAGAGCAGTGCTGCTGTATTTGTAGTEST: gi|33676574|gb|CF304813.1|CF304813
genomic: TCAGACCAAAGAGCAAGCTGAACTATGCTGCCAAACATTTGTACCTTGAGgtttgttctg ... tccctaatagGTACCCTTAGATTGCAGCAGGACAAAAGAGCAGTGCTGCTGTATTTGTAGT
EST: TCAGACCAAAGAGCAAGCTGAACTATGCTGCCAAACATTTGTACCTTGAG GTACCCTTAGATTGCAGCAGGACAAAAGAGCAGTGCTGCTGTATTTGTAGTEST: gi|58674908|gb|CK063595.1|CK063595
genomic: TCAGACCAAAGAGCAAGCTGAACTATGCTGCCAAACATTTGTACCTTGAGgtttgttctg ... tccctaatagGTACCCTTAGATTGCAGCAGGACAAAAGAGCAGTGCTGCTGTATTTGTAGT
EST: GCTGAACTATGCTGCCAAACATTTGTACCTTGAG GTACCCTTAGATTGCAGCAGGACGAAAGAGCAGTGCTGCTGTATTTGTAGTEST: gi|58676595|gb|CK065282.1|CK065282
genomic: GCTGAACTATGCTGCCAAACATTTGTACCTTGAGgtttgttctg ... tccctaatagGTACCCTTAGATTGCAGCAGGACAAAAGAGCAGTGCTGCTGTATTTGTAGT
EST: TCAGACCCAAGAGCAAGCTGAACTATGCTGCCAAACATTTGTACCTTGAG GTACCCTTAGATTGCAGCAGGACCAAAGAGCAGTGCTGCTGTATTTGTAGTEST: gi|33793822|gb|CF322799.1|CF322799
genomic: TCAGACCAAAGAGCAAGCTGAACTATGCTGCCAAACATTTGTACCTTGAGgtttgttctg ... tccctaatagGTACCCTTAGATTGCAGCAGGACAAAAGAGCAGTGCTGCTGTATTTGTAGT
EST: TCAGACCAAAGAGCAAGCTGAACTATGCTGCCAAACATTTGTACCTTGAG GTACCCTTAGATTGCAGCAGGACAAAAGAGCAGTGCTGCTGTATTTGTAGTEST: gi|38479722|gb|CF963811.1|CF963811
genomic: TCAGACCAAAGAGCAAGCTGAACTATGCTGCCAAACATTTGTACCTTGAGgtttgttctg ... tccctaatagGTACCCTTAGATTGCAGCAGGACAAAAGAGCAGTGCTGCTGTATTTGTAGT
EST: TCAGACCAAAGAGCAAGCTGAACTATGCTGCCAAACATTTGTACCTTGAG GTACCCTTAGATTGCAGCAGGACAAAAGAGCAGTGCTGCTGTATTTGTAGTEST: gi|29677295|gb|CB673570.1|CB673570
genomic: TCAGACCAAAGAGCAAGCTGAACTATGCTGCCAAACATTTGTACCTTGAGgtttgttctg ... tccctaatagGTACCCTTAGATTGCAGCAGGACAAAAGAGCAGTGCTGCTGTATTTGTAGT
EST: TCAGACCAAAGAGCAAGCTGAACTATGCTGCCAAACATTTGTACCTTGAG GTACCCTTAGATTGCAGCAGGACAAAAGAGCAGTGCTGCTGTATTTGGAGT
genomic: TCAGACCAAAGAGCAAGCTGAACTATGCTGCCAAACATTTGTACCTTGAGgtttgttctg ... tccctaatagGTACCCTTAGATTGCAGCAGGACAAAAGAGCAGTGCTGCTGTATTTGTAGT
gttatcttttcttgtgattatctggtagtaactgttctttttctgtccctaatagGTACCCTTAGATTGCAGCAGGACAAAAGAGCAGTGCTGCTGTATTTGTAGTACTGGTTCTTACCTGGCAAGTAATCCCCCTTGCATTCATAAG
tagtaac putative branch site (score: 17)
ctgttctttttctgtc CT-rich tract
ttcttttt TA-rich tract