1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtaagaaatcatctcttgtagtttgcagtcgtatcctttatatgaagtaaagctgattaaaatgtcattttccttgcaatagaaccaattacggttcttgtagctaattaagcatcttccttgcagCATTCTTTTGTTAAGCAGTTTTCTGGGTCAGTTACTAAATCAGACTACATAACAATGCGACTTGGATTTATCCAG
species | Oryza sativa |
transcript | LOC_Os01g66510.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GGAACCGCTTTAAGGGTATTGGCAAAGATTCCATAATACTAAGCTGGCTG CATTCTTTTGTTAAGCAGTTTTCTGGGTCAGTTACTAAATCAGACTACATA
genomic: GGAA-CGCTTTAAGGGTATTGGCAAAGATTCCATAATACTAAGCTGGCTGgtaagaaatc ... ttccttgcagCATTCTTTTGTTAAGCAGTTTTCTGGGTCAGTTACTAAATCAGACTACATA
ccttgcaatagaaccaattacggttcttgtagctaattaagcatcttccttgcagCATTCTTTTGTTAAGCAGTTTTCTGGGTCAGTTACTAAATCAGACTACATAACAATGCGACTTGGATTTATCCAG
agctaat putative branch site (score: 10)
catcttcctt putative PPT
taattaa TA-rich tract