1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...ctgttgtctagctaaatgcagcatcctgtatctctggcatcactagctgtataagtaacactctgaagtctggattatcttcatactacttgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGTGTCAAGCACTGGTTTACATTTAATGAGCCAAGGATAGTAGCACTTCTT
species | Oryza sativa |
transcript | LOC_Os03g49600.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|5004341|gb|AU069490.1|AU069490
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|33793788|gb|CF322778.1|CF322778
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|58676021|gb|CK064708.1|CK064708
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|33797376|gb|CF324550.1|CF324550
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|14189009|gb|AU183652.1|AU183652
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCEST: gi|32948487|gb|BP185059.1|BP185059
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGG-AGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATC
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|218501129|gb|FG969556.1|FG969556
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|58686123|gb|CK074810.1|CK074810
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGEST: gi|58656764|gb|CK045444.1|CK045444
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGEST: gi|29672036|gb|CB668311.1|CB668311
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|33381892|gb|CF197235.1|CF197235
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|88212028|gb|CI211668.1|CI211668
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|58677218|gb|CK065905.1|CK065905
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|33794165|gb|CF322973.1|CF322973
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACTTTTGGCAATCGEST: gi|58678675|gb|CK067362.1|CK067362
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGAGTCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCEST: gi|58682006|gb|CK070693.1|CK070693
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGA-TCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATC
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGEST: gi|58680064|gb|CK068751.1|CK068751
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTEST: gi|29657770|gb|CB654045.1|CB654045
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTT
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|86898371|gb|CI292293.1|CI292293
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|15852844|gb|BI805640.1|BI805640
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTT-GGCAATCGEST: gi|33795224|gb|CF323484.1|CF323484
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|33675008|gb|CF303247.1|CF303247
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|218498123|gb|FG968220.1|FG968220
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|218482013|gb|FG963445.1|FG963445
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|40490189|gb|BX899802.1|BX899802
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAGGACCTTTGGCAATCGEST: gi|29643770|gb|CB648777.1|CB648777
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|428803|gb|D24959.1|D24959
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|58675601|gb|CK064288.1|CK064288
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTEST: gi|29638180|gb|CB643189.1|CB643189
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTT
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|58685477|gb|CK074164.1|CK074164
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGEST: gi|58680012|gb|CK068699.1|CK068699
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCG
EST: CCCCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|58685224|gb|CK073911.1|CK073911
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|29678657|gb|CB674932.1|CB674932
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|58668191|gb|CK056877.1|CK056877
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|8860126|gb|AU097444.1|AU097444
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTANGCGGACTTCTGNTTCAAGACCTTTGGCAATCGEST: gi|58682160|gb|CK070847.1|CK070847
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|58679549|gb|CK068236.1|CK068236
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTGCAAGACCTTTGGCAATCGEST: gi|29629596|gb|CB634605.1|CB634605
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|14189007|gb|AU183650.1|AU183650
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCEST: gi|33795297|gb|CF323520.1|CF323520
genomic: CTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGG-Cgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATC
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|58681508|gb|CK070195.1|CK070195
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAAGTCEST: gi|58683209|gb|CK071896.1|CK071896
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAA-TC
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|14189008|gb|AU183651.1|AU183651
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|700314|gb|D46605.1|D46605
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|29667382|gb|CB663657.1|CB663657
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|58660539|gb|CK049219.1|CK049219
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|33674893|gb|CF303132.1|CF303132
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|29638848|gb|CB643857.1|CB643857
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGEST: gi|29671916|gb|CB668191.1|CB668191
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
EST: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGC GGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
genomic: CCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCgtaagtcaaa ... tgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCG
gctgtataagtaacactctgaagtctggattatcttcatactacttgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGTGTCAAGCACTGGTTTACATTTAATGAGCCAAGGATAGTAGCACTTCTT
aagtaac putative branch site (score: 144)
cttgttct putative PPT
ataagtaa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ctgttgtctagctaaatgcagcatcctgtatctctggcatcactagctgtataagtaacactctgaagtctggattatcttcatactacttgttctgtagGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGTGTCAAGCACTGGTTTACATTTAATGAGCCAAGGATAGTAGCACTTCTT
ctgttgt
- - - - -agctaaa
- - - - - - - - tgcagca
- - - - - - - - - - - - -ctgtatc
- - - - - - - - - - - - - - - - - tggcatc
- - - - - - - - - - - - - - - - - - - - - ctagctg