1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' |
...tagctcaccagttcacttttacctaaactctatatatgagctgatttcctgtcaaagatcaggatagaaaagcacaactcactttaccattctggtacagGATCGCTTAAAGAAACTTAAATCAGAACATGGGAAGGTCCAGCTTGGAAACATAACTGTTGATATG
species | Oryza sativa |
transcript | LOC_Os11g33240.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GATCTTAAGTCCCAGCTGCAGGAATTGATTCCCGAGCAACAG GATCGCTTAAAGAAACTTAAATCAGAACATGGGAAGGTCCAGCTTGGAAACEST: gi|33793807|gb|CF322790.1|CF322790
genomic: GATCTTAAGTCCCAGCTGCAGGAATTGATTCCCGAGCAACAGgtatgttttg ... tctggtacagGATCGCTTAAAGAAACTTAAATCAGAACATGGGAAGGTCCAGCTTGGAAAC
EST: GATCTTAAGTCCCAGCTGCAGGAATTGATTCCCGAGCAACAG GATCGCTTAAAGAAACTTAAATCAGAACATGGGAAGGTCCAGCTTGGAAACEST: gi|86904765|gb|CI310558.1|CI310558
genomic: GATCTTAAGTCCCAGCTGCAGGAATTGATTCCCGAGCAACAGgtatgttttg ... tctggtacagGATCGCTTAAAGAAACTTAAATCAGAACATGGGAAGGTCCAGCTTGGAAAC
EST: GATTCCCGAGCAACAG GATCGCTTAAAGAAACTTAAATCAGAACATGGGAAGGTCCAGCTTGGAAACEST: gi|88359778|gb|CI622468.1|CI622468
genomic: GATTCCCGAGCAACAGgtatgttttg ... tctggtacagGATCGCTTAAAGAAACTTAAATCAGAACATGGGAAGGTCCAGCTTGGAAAC
EST: GATCTTAAGTCCCAGCTGCAGGAATTGATTCCCGAGCAACAG GATCGCTTAAAGAAA
genomic: GATCTTAAGTCCCAGCTGCAGGAATTGATTCCCGAGCAACAGgtatgttttg ... tctggtacagGATCGCTTAAAGAAA
ttcctgtcaaagatcaggatagaaaagcacaactcactttaccattctggtacagGATCGCTTAAAGAAACTTAAATCAGAACATGGGAAGGTCCAGCTTGGAAACATAACTGTTGATATG
aactcac putative branch site (score: 2)
ccattct putative PPT
atagaaaa TA-rich tract