1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gtaagaatttcacacaatctatcccttctgatgtttatgttgttctatgtggagtatgatccattaaccttttgtccttttgtaaatagCACTCTCAATGGTTGTTATGGCATACCATCAGTCCACTATAAGGGTCGTTTGGGAGACTACTACATTCTT
species | Oryza sativa |
transcript | LOC_Os03g57940.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGCAGTAAAGGATGTAACTATGGCCCTCCATACGAGTGGCAGGTTTACCA CACTCTCAATGGTTGTTATGGCATACCATCGGTCCACTATAAGGGTCGTTTEST: gi|29616079|gb|CB621091.1|CB621091
genomic: AGCAGTAAAGGATGTAACTATGGCCCTCCATACGAGTGGCAGGTTTACCAgtaagaattt ... ttgtaaatagCACTCTCAATGGTTGTTATGGCATACCATCAGTCCACTATAAGGGTCGTTT
EST: AGCAGTAAAGGATGTAACTATGGCCCTCCATACGAGTGGCAGGTTTACCA CACTCTCAATGGTTGTTATGGCATACCATCGGNCCACTATAAGGGTCGTTT
genomic: AGCAGTAAAGGATGTAACTATGGCCCTCCATACGAGTGGCAGGTTTACCAgtaagaattt ... ttgtaaatagCACTCTCAATGGTTGTTATGGCATACCATCAGTCCACTATAAGGGTCGTTT
ttatgttgttctatgtggagtatgatccattaaccttttgtccttttgtaaatagCACTCTCAATGGTTGTTATGGCATACCATCAGTCCACTATAAGGGTCGTTTGGGAGACTACTACATTCTT
cattaac putative branch site (score: 2)
ccttttgtccttttgt CT-rich tract
ttttgtaaata TA-rich tract