1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaagatgacctggcattttttacaaacagaagaaaaaacattggcaacaaaatctgataagaaccgaatacttgcagACTTGCGTGAGGACAAGCAGTTCTTCCTGGACCACCCTGGTCTAGCACCTATTTCCACTGCACAG
species | Oryza sativa |
transcript | LOC_Os02g20850.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GAGGCATTATGCTCCTAATGTGCCAATCGTATTAGTTGGAACCAAGCTTG ACTTGCGTGAGGACAAGCAGTTCTTCCTGGACCACCCTGGTCTAGCACCTAEST: gi|33675900|gb|CF304139.1|CF304139
genomic: GAGGCATTATGCTCCTAATGTGCCAATCGTATTAGTTGGAACCAAGCTTGgtaagatgac ... atacttgcagACTTGCGTGAGGACAAGCAGTTCTTCCTGGACCACCCTGGTCTAGCACCTA
EST: GAGGCATTATGCTCCTAATGTGCCAATCGTATTAGTTGGAACCAAGCTTG ACTTGCGTGAGGACAAGCAGTTCTTCCTGGACCACCCTGGTCTAGCACCTAEST: gi|33681463|gb|CF309702.1|CF309702
genomic: GAGGCATTATGCTCCTAATGTGCCAATCGTATTAGTTGGAACCAAGCTTGgtaagatgac ... atacttgcagACTTGCGTGAGGACAAGCAGTTCTTCCTGGACCACCCTGGTCTAGCACCTA
EST: GAGGCATTATGCTCCTAATGTGCCAATCGTATTAGTTGGAACCAAGCTTG ACTTGCGTGAGGACAAGCAGTTCTTCCTGGACCGCCCTGGTCTAGCACCTA
genomic: GAGGCATTATGCTCCTAATGTGCCAATCGTATTAGTTGGAACCAAGCTTGgtaagatgac ... atacttgcagACTTGCGTGAGGACAAGCAGTTCTTCCTGGACCACCCTGGTCTAGCACCTA
caaacagaagaaaaaacattggcaacaaaatctgataagaaccgaatacttgcagACTTGCGTGAGGACAAGCAGTTCTTCCTGGACCACCCTGGTCTAGCACCTATTTCCACTGCACAG
atctgat putative branch site (score: 9)
aaaaaacatt TA-rich tract