1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtacattgagtctgactcagattgtagcatgttgccctgataccctgcatcattttttttaatgacaatttgttactgccaaatatgcgcctttggtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTATAAACTACCTTCTGCAGAAAG
species | Oryza sativa |
transcript | LOC_Os03g49600.3 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|29667348|gb|CB663623.1|CB663623
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58655963|gb|CK044643.1|CK044643
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTANCATATTACAACAATCTTAEST: gi|58680369|gb|CK069056.1|CK069056
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58679305|gb|CK067992.1|CK067992
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAAEST: gi|5004341|gb|AU069490.1|AU069490
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58597861|gb|CK008389.1|CK008389
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58684594|gb|CK073281.1|CK073281
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|29636221|gb|CB641230.1|CB641230
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58598211|gb|CK008739.1|CK008739
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGEST: gi|33793788|gb|CF322778.1|CF322778
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAG
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58676021|gb|CK064708.1|CK064708
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|33797376|gb|CF324550.1|CF324550
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|14189009|gb|AU183652.1|AU183652
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTA-CATATTACAACAATCTTAEST: gi|58601425|gb|CK011953.1|CK011953
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|32948487|gb|BP185059.1|BP185059
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58661822|gb|CK050502.1|CK050502
genomic: GGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACEST: gi|58601658|gb|CK012186.1|CK012186
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAAC
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58686123|gb|CK074810.1|CK074810
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58656764|gb|CK045444.1|CK045444
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58669383|gb|CK058069.1|CK058069
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|29672036|gb|CB668311.1|CB668311
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|11026259|gb|AU162860.1|AU162860
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTA-CATATTACAACAATCTTAEST: gi|58665090|gb|CK053776.1|CK053776
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAAGAAGGCGTAGCATATTACAACAATCTTEST: gi|58677218|gb|CK065905.1|CK065905
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAA-GAAGGCGTAGCATATTACAACAATCTT
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|33794165|gb|CF322973.1|CF322973
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|13423190|gb|AU176521.1|AU176521
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58589976|gb|CF988284.1|CF988284
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58592952|gb|CF991260.1|CF991260
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58670653|gb|CK059339.1|CK059339
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58655284|gb|CK043964.1|CK043964
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58682006|gb|CK070693.1|CK070693
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58680064|gb|CK068751.1|CK068751
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58674624|gb|CK063311.1|CK063311
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|29657770|gb|CB654045.1|CB654045
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|15852844|gb|BI805640.1|BI805640
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAA-TTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58603614|gb|CK014142.1|CK014142
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|33795224|gb|CF323484.1|CF323484
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|33675008|gb|CF303247.1|CF303247
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|8859885|gb|AU097203.1|AU097203
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTANG-ATATTACAACAATCTTEST: gi|58677937|gb|CK066624.1|CK066624
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTA-GCATATTACAACAATCTT
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|40490189|gb|BX899802.1|BX899802
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58683697|gb|CK072384.1|CK072384
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58681752|gb|CK070439.1|CK070439
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|29635607|gb|CB640616.1|CB640616
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAAGCGTAGCATATTACAACAATCTTAEST: gi|29643770|gb|CB648777.1|CB648777
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58684613|gb|CK073300.1|CK073300
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: AATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGGATCTTCCCAG ATGGTGAGGGACGAGTEST: gi|29635223|gb|CB640232.1|CB640232
genomic: AATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGG-ATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGT
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACEST: gi|58659974|gb|CK048654.1|CK048654
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAAC
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58675601|gb|CK064288.1|CK064288
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|29638180|gb|CB643189.1|CB643189
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58677515|gb|CK066202.1|CK066202
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58685477|gb|CK074164.1|CK074164
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58680012|gb|CK068699.1|CK068699
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58685224|gb|CK073911.1|CK073911
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|29678657|gb|CB674932.1|CB674932
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|8860126|gb|AU097444.1|AU097444
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTA-CATATTACAACAATCTTAEST: gi|58655540|gb|CK044220.1|CK044220
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58658330|gb|CK047010.1|CK047010
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58682160|gb|CK070847.1|CK070847
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58612837|gb|CK040549.1|CK040549
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58679549|gb|CK068236.1|CK068236
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58680065|gb|CK068752.1|CK068752
genomic: GGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58677281|gb|CK065968.1|CK065968
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58663549|gb|CK052235.1|CK052235
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|29629596|gb|CB634605.1|CB634605
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|14189007|gb|AU183650.1|AU183650
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTA-CATATTACAACAATCTTAEST: gi|58658921|gb|CK047601.1|CK047601
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58679788|gb|CK068475.1|CK068475
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|33795297|gb|CF323520.1|CF323520
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58669127|gb|CK057813.1|CK057813
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|14189008|gb|AU183651.1|AU183651
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTA-NATATTACAACAATCTTAEST: gi|700314|gb|D46605.1|D46605
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAG-ATNATTACAACAATCTTEST: gi|58658818|gb|CK047498.1|CK047498
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCAT-ATTACAACAATCTT
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATAEST: gi|29635878|gb|CB640887.1|CB640887
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGATGAGGGACGAGTTAACEST: gi|29667382|gb|CB663657.1|CB663657
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAAC
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58660539|gb|CK049219.1|CK049219
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|58678308|gb|CK066995.1|CK066995
genomic: GCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACEST: gi|33674893|gb|CF303132.1|CF303132
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAAC
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|29638848|gb|CB643857.1|CB643857
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTAEST: gi|8859114|gb|AU096432.1|AU096432
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
EST: AATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGGATCTTCCCAG NEST: gi|8859114|gb|AU096432.1|AU096432
genomic: AATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGG-ATCTTCCCAGgtacattgag ... gtgtacctag-
EST: AATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGGATCTTCCCAG NEST: gi|29671916|gb|CB668191.1|CB668191
genomic: AATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGG-ATCTTCCCAGgtacattgag ... gtgtacctag-
EST: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAG ATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
genomic: GAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGgtacattgag ... gtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTA
cattttttttaatgacaatttgttactgccaaatatgcgcctttggtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTATAAACTACCTTCTGCAGAAAG
ttttaat putative branch site (score: 3)
tttttaatgacaattt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtacattgagtctgactcagattgtagcatgttgccctgataccctgcatcattttttttaatgacaatttgttactgccaaatatgcgcctttggtgtacctagATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTATAAACTACCTTCTGCAGAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG