1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' |
gtaaacaatatttggatggtgtcttaaatcggaaataaaaaataaaaaaaatgttatggtgtctttgttgctcactgccatagtgttatgcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAGAACCGTTACTCTACGGGATTCCTATGGAAAAGCTGGACCCAAGTGATC
species | Oryza sativa |
transcript | LOC_Os05g08990.1 |
intron # | 21 |
splice site | 3' |
intron type | U2 |
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88838558|gb|CI375106.1|CI375106
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88259382|gb|CI363675.1|CI363675
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|89195040|gb|CI051153.1|CI051153
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88449517|gb|CI538874.1|CI538874
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|12404996|gb|AU166597.1|AU166597
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88376405|gb|CI535509.1|CI535509
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTNCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|89178347|gb|CI391526.1|CI391526
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88469884|gb|CI407155.1|CI407155
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAAGTGCAGCGCTGGGGGACAAATTTCAGTTTGAACNCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGGTGAGGAACTTGTGTTCAACAEST: gi|86822597|gb|CI358086.1|CI358086
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGGACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGA-GAACTTGTGTTCAACAEST: gi|88978056|gb|CI384538.1|CI384538
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCT-GGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTTAGGAACTTGTGTTCAACAEST: gi|88846703|gb|CI373471.1|CI373471
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88532915|gb|CI461365.1|CI461365
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88451572|gb|CI539363.1|CI539363
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88462808|gb|CI519720.1|CI519720
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGAATTCCGACTCGACGGGTGAGGAACTTGTGTTCAACAEST: gi|88507993|gb|CI435499.1|CI435499
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|87022785|gb|CI269721.1|CI269721
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88262438|gb|CI366212.1|CI366212
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTCCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88266902|gb|CI368678.1|CI368678
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88470542|gb|CI407813.1|CI407813
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCGTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88508075|gb|CI435581.1|CI435581
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88263378|gb|CI367152.1|CI367152
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|89189666|gb|CI049205.1|CI049205
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88514203|gb|CI441709.1|CI441709
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|86437465|gb|CI119187.1|CI119187
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88547864|gb|CI478192.1|CI478192
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: CAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88848757|gb|CI087279.1|CI087279
genomic: CAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88464199|gb|CI532134.1|CI532134
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88262244|gb|CI365820.1|CI365820
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|86487083|gb|CI129716.1|CI129716
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|89178762|gb|CI391760.1|CI391760
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88320259|gb|CI520803.1|CI520803
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88262431|gb|CI366205.1|CI366205
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|86865746|gb|CI335445.1|CI335445
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAAGAACTTGTGTTCAACAEST: gi|87022805|gb|CI269741.1|CI269741
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88276730|gb|CI397532.1|CI397532
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: GGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88555435|gb|CI485692.1|CI485692
genomic: GGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88971448|gb|CI017762.1|CI017762
genomic: TGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88323184|gb|CI550863.1|CI550863
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|87029369|gb|CI250302.1|CI250302
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88274867|gb|CI388325.1|CI388325
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88471089|gb|CI408360.1|CI408360
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88473778|gb|CI411049.1|CI411049
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCNCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|88433650|gb|CI557386.1|CI557386
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|86481762|gb|CI124395.1|CI124395
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAEST: gi|86481706|gb|CI124339.1|CI124339
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
EST: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCG GTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
genomic: TTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGgtaaacaata ... gcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACA
aaaaaaatgttatggtgtctttgttgctcactgccatagtgttatgcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAGAACCGTTACTCTACGGGATTCCTATGGAAAAGCTGGACCCAAGTGATC
tgctcac putative branch site (score: 2)
aatgttat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaaacaatatttggatggtgtcttaaatcggaaataaaaaataaaaaaaatgttatggtgtctttgttgctcactgccatagtgttatgcaattacagGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAGAACCGTTACTCTACGGGATTCCTATGGAAAAGCTGGACCCAAGTGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA