1 5' 3' | 2 5' 3' | 3 5' 3' |
gtatgtcttctctcagcgtgtactgttactgatctgtagacatgaagctgtgattgattgtttatacacaatgatgtcaggactcatgccacaacccatactgttacatttctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGTGGTTGAGCTGAATGGACGCCTTAACAAGTGTGGTGTCATCAGCCCACG
species | Oryza sativa |
transcript | LOC_Os07g10720.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATTGTCATGCAGAAGCGTG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|89176324|gb|CI043345.1|CI043345
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: CTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88741795|gb|CI765303.1|CI765303
genomic: CTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88210127|gb|CI209976.1|CI209976
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|27578056|gb|CB000751.1|CB000751
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: CAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|86422625|gb|CI060198.1|CI060198
genomic: CAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTGATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88506836|gb|CI434342.1|CI434342
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTTGTTGATGACCACCGGTCTGGCAAGATCEST: gi|86525457|gb|CI165663.1|CI165663
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAG-TTTGTTGATGACCACCGGTCTGGCAAGATC
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88982806|gb|CI028219.1|CI028219
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88244443|gb|CI243565.1|CI243565
genomic: GTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: ATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|86821490|gb|CI266866.1|CI266866
genomic: ATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|86531424|gb|CI171630.1|CI171630
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: CGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|87020559|gb|CI263422.1|CI263422
genomic: CGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: TTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|15852019|gb|BI800295.1|BI800295
genomic: TTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: CAAAGGTGATCATCAGAGTTCCTCATTGTCATCGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88210120|gb|CI209969.1|CI209969
genomic: CAAAGGTGATCATCA-AGTTCCTCATCGTCAT-GCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|86419643|gb|CI054444.1|CI054444
genomic: GTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTGATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|86531815|gb|CI172021.1|CI172021
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|38473273|gb|CF957405.1|CF957405
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTTATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88241898|gb|CI241747.1|CI241747
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|86512909|gb|CI155542.1|CI155542
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|86256896|gb|CI061659.1|CI061659
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|86859335|gb|CI278780.1|CI278780
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|30226541|gb|CB964433.1|CB964433
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88242573|gb|CI242422.1|CI242422
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|86533539|gb|CI173745.1|CI173745
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: TTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|86531816|gb|CI172022.1|CI172022
genomic: TTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: TTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|86522490|gb|CI162696.1|CI162696
genomic: TTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88212232|gb|CI211872.1|CI211872
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: AGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|86532005|gb|CI172211.1|CI172211
genomic: AGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: TCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88210345|gb|CI210194.1|CI210194
genomic: TCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|86528987|gb|CI169193.1|CI169193
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|58668414|gb|CK057100.1|CK057100
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|15848634|gb|BI796910.1|BI796910
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: CCCTCAGTCAAAGGTGATCATCAAGTTCCTCATTGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88212042|gb|CI211682.1|CI211682
genomic: CCCTC-GTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88236979|gb|CI236828.1|CI236828
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: AGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|87022509|gb|CI267646.1|CI267646
genomic: AGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|89167277|gb|CI252808.1|CI252808
genomic: GTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|30227776|gb|CB965668.1|CB965668
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: CCCTCGTCAAAGGTGATCATTCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88204167|gb|CI204016.1|CI204016
genomic: CCCTCGTCAAAGGTGATCA-TCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|86423014|gb|CI060587.1|CI060587
genomic: GATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: TCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88208977|gb|CI208826.1|CI208826
genomic: TCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|86258312|gb|CI064665.1|CI064665
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|23514163|gb|BU673493.1|BU673493
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|86534694|gb|CI174900.1|CI174900
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: TCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88240175|gb|CI239337.1|CI239337
genomic: TCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88207248|gb|CI207097.1|CI207097
genomic: GTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGEST: gi|88209802|gb|CI209651.1|CI209651
genomic: GTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
EST: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATG GTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
genomic: GCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGgtatgtcttc ... ctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCG
cacaatgatgtcaggactcatgccacaacccatactgttacatttctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGTGGTTGAGCTGAATGGACGCCTTAACAAGTGTGGTGTCATCAGCCCACG
ttctgac putative branch site (score: 148)
catttct CT-rich tract
ttacattt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtatgtcttctctcagcgtgtactgttactgatctgtagacatgaagctgtgattgattgtttatacacaatgatgtcaggactcatgccacaacccatactgttacatttctgactgcagGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGTGGTTGAGCTGAATGGACGCCTTAACAAGTGTGGTGTCATCAGCCCACG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA