1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtatgcttcttactgtcgtgccttctttatgcagctcttcatttaaacatgctcttacatgtcttttgttctctttctgaagTAATGCGCGCAAAGAATGTCCTGGACCTATTACGGCAAAGAATATGAAGGAGATACACAGACCAGCTAATCAAGTACATGGTAGCCATATATTATCCACA
species | Oryza sativa |
transcript | LOC_Os04g47240.3 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GGAAATGATGCCGAAAATGCAACACTTGTTACTTTAAAGAACAAGTCAAG TAATGCGCGCAAAGAATGTCCTGGACCTATTACGGCAAAGAATATGAAGGA
genomic: GGAAATGATGCCGAAAATGCAACACTTGTTACTTTAAAGAACAAGTCAAGgtatgcttct ... ctttctgaagTAATGCGCGCAAAGAATGTCCTGGACCTATTACGGCAAAGAATATGAAGGA
tatgcagctcttcatttaaacatgctcttacatgtcttttgttctctttctgaagTAATGCGCGCAAAGAATGTCCTGGACCTATTACGGCAAAGAATATGAAGGAGATACACAGACCAGCTAATCAAGTACATGGTAGCCATATATTATCCACA
ctcttac putative branch site (score: 3)
ctcttacatgtctttt CT-rich tract
ttcatttaaa TA-rich tract