1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtattcaccattcactcaatgcgccatttcccttgtaattaggctgtctccctgctgcaatagctgcttgttctttgtctcttacagtttataaatgccggcattgttcttctagATAAGTGGCATGGAAGAAGCCCTGGAAATTCCGGTGCTCAATGATCTCACAATGGTTCTGGGCTCAATTGCACAA
species | Oryza sativa |
transcript | LOC_Os03g02690.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: AGCTTGCAGGGGCCATAGATTCTCAGTGTATAGGCCTAGATGCAGGAGAG ATAAGTGGCATGGAAGAAGCCCTGGAAATTCCGGTGCTCAATGATCTCACAEST: gi|58672859|gb|CK061545.1|CK061545
genomic: AGCTTGCAGGGGCCATAGATTCTCAGTGTATAGGCCTAGATGCAGGAGAGgtattcacca ... gttcttctagATAAGTGGCATGGAAGAAGCCCTGGAAATTCCGGTGCTCAATGATCTCACA
EST: AGCTTGCAGGGGCCATAGATTCTCAGTGTATAGGCCTAGATGCAGGAGAG ATAAGTGGCATGGAAGAAGCCCTGGAAATTCCGGTGCTCAATGATCTCACAEST: gi|27546884|gb|CA764989.2|CA764989
genomic: AGCTTGCAGGGGCCATAGATTCTCAGTGTATAGGCCTAGATGCAGGAGAGgtattcacca ... gttcttctagATAAGTGGCATGGAAGAAGCCCTGGAAATTCCGGTGCTCAATGATCTCACA
EST: AGCTTGCAGGGGCCATAGATTCTCAGTGTATAGGCCTAGATGCAGGAGAG ATAAGTGGCATGGAAGAAGCCCTGGAAATTCCGGTGCTCAATGATCTCACAEST: gi|58606567|gb|CK034600.1|CK034600
genomic: AGCTTGCAGGGGCCATAGATTCTCAGTGTATAGGCCTAGATGCAGGAGAGgtattcacca ... gttcttctagATAAGTGGCATGGAAGAAGCCCTGGAAATTCCGGTGCTCAATGATCTCACA
EST: AGCTTGCAGGGGCCATAGATTCTCAGTGTATAGGCCTAGATGCAGGAGAG ATAAGTGGCATGGAAGAAGCCNCTGGAAATTCCGGTGCTCAATGATCTCACEST: gi|29684781|gb|CB681056.1|CB681056
genomic: AGCTTGCAGGGGCCATAGATTCTCAGTGTATAGGCCTAGATGCAGGAGAGgtattcacca ... gttcttctagATAAGTGGCATGGAAGAAGCC-CTGGAAATTCCGGTGCTCAATGATCTCAC
EST: AGCTTGCAGGGGCCATAGATTCTCAGTGTATAGGCCTAGATGCAGGAGAG ATAAGTGGCATGGAAGAAGCCCTGGAAATTCCGGTGCTCAATGATCTCACA
genomic: AGCTTGCAGGGGCCATAGATTCTCAGTGTATAGGCCTAGATGCAGGAGAGgtattcacca ... gttcttctagATAAGTGGCATGGAAGAAGCCCTGGAAATTCCGGTGCTCAATGATCTCACA
tagctgcttgttctttgtctcttacagtttataaatgccggcattgttcttctagATAAGTGGCATGGAAGAAGCCCTGGAAATTCCGGTGCTCAATGATCTCACAATGGTTCTGGGCTCAATTGCACAA
ctcttac putative branch site (score: 6)
ttgttcttct putative PPT
ttacagtttataaat TA-rich tract