1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...gtcactgaaacaggagcacgatgcaaagctaaagcaacaacttgttttgtgttacacctggcacacattttttggagcttattgatacctttttgttcagGCTACTGCAGATGGGAATAGAACCAATGGACCAGCTTTGCTTGTCAATGATCAGAATAAGTACAAGTCAATGCTTATCCGTACATATTCTACAGTATGGA
species | Oryza sativa |
transcript | LOC_Os01g55360.3 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TTTCTGCTTCTCATGTAGGACGTGCCAGGCAGCGAAGACGTCCTACTGAG GCTACTGCAGATGGGAATAGAACCAATGGACCAGCTTTGCTTGTCAATGATEST: gi|29681974|gb|CB678249.1|CB678249
genomic: TTTCTGCTTCTCATGTAGGACGTGCCAGGCAGCGAAGACGTCCTACTGAGgtaggctatt ... ttttgttcagGCTACTGCAGATGGGAATAGAACCAATGGACCAGCTTTGCTTGTCAATGAT
EST: AGGACGTGCCACCCTGCGAAGACGTCCTACTGAG GCTACTGCAGATGGGAATAGAACCAATGGACCAGCTTTGCTTGTCAATGAT
genomic: AGGACGTGCCAGGCAGCGAAGACGTCCTACTGAGgtaggctatt ... ttttgttcagGCTACTGCAGATGGGAATAGAACCAATGGACCAGCTTTGCTTGTCAATGAT
tttgtgttacacctggcacacattttttggagcttattgatacctttttgttcagGCTACTGCAGATGGGAATAGAACCAATGGACCAGCTTTGCTTGTCAATGATCAGAATAAGTACAAGTCAATGCTTATCCGTACATATTCTACAGTATGGA
tattgat putative branch site (score: 3)
cctttttgttc CT-rich tract
acatttttt TA-rich tract