1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...tagtgtgtgttcaccatgctcgaaatactttgcatagataattctttatgttatagttatgcatttcctgcacactaattctcaatccaaatttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGCTAGTTCGGTGGTCAAGATCGGCTGATGAACATGTTAAGCTTCATCGAC
species | Oryza sativa |
transcript | LOC_Os09g26880.3 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88263049|gb|CI366823.1|CI366823
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTT TACGATCAACTATGGAAGCGAACTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29669203|gb|CB665478.1|CB665478
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29655856|gb|CB652131.1|CB652131
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29674835|gb|CB671110.1|CB671110
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29668656|gb|CB664931.1|CB664931
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88850062|gb|CI091357.1|CI091357
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86525119|gb|CI165325.1|CI165325
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86537062|gb|CI177268.1|CI177268
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: GAGGTCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88850211|gb|CI091704.1|CI091704
genomic: GAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88970837|gb|CI385434.1|CI385434
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCTTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88850091|gb|CI091386.1|CI091386
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGGTTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|3462549|gb|AF074787.1|AF074787
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29638872|gb|CB643881.1|CB643881
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29665769|gb|CB662044.1|CB662044
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29664946|gb|CB661221.1|CB661221
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86867555|gb|CI337927.1|CI337927
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: GAGAAGCCAGGGAGTGATTCGTGGAACCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86893167|gb|CI313351.1|CI313351
genomic: GAGAAG-CAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAACCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88834218|gb|CI000582.1|CI000582
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86861222|gb|CI328037.1|CI328037
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGT-GAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29670253|gb|CB666528.1|CB666528
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|40493989|gb|BX901803.1|BX901803
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAACCAGGGAGTGATTCGTGGAACCAGTACATGAGGAGGCCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86430515|gb|CI082938.1|CI082938
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29619465|gb|CB624477.1|CB624477
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88905899|gb|CI089485.1|CI089485
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGTTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29617472|gb|CB622484.1|CB622484
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29670275|gb|CB666550.1|CB666550
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86492111|gb|CI134744.1|CI134744
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86525160|gb|CI165366.1|CI165366
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|15858562|gb|BI811374.1|BI811374
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: GAGAAGCACGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29663941|gb|CB660216.1|CB660216
genomic: GAGAAGCA-GGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88251101|gb|CI349331.1|CI349331
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88511229|gb|CI438735.1|CI438735
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: AGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86434828|gb|CI106061.1|CI106061
genomic: AGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTGTGGEST: gi|89166746|gb|CI104032.1|CI104032
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86413205|gb|CI067610.1|CI067610
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88506414|gb|CI433920.1|CI433920
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86851925|gb|CI316494.1|CI316494
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29629464|gb|CB634473.1|CB634473
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29656048|gb|CB652323.1|CB652323
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29664016|gb|CB660291.1|CB660291
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86845912|gb|CI347145.1|CI347145
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29639263|gb|CB644272.1|CB644272
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29673830|gb|CB670105.1|CB670105
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29613124|gb|CB618137.1|CB618137
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86432477|gb|CI086088.1|CI086088
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGTACAAGGAATAAATTTTGGEST: gi|33677828|gb|CF306067.1|CF306067
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29628533|gb|CB633544.1|CB633544
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATAAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29631159|gb|CB636168.1|CB636168
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29663978|gb|CB660253.1|CB660253
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88465378|gb|CI529598.1|CI529598
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88976985|gb|CI257681.1|CI257681
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAACCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86426989|gb|CI072086.1|CI072086
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|89162077|gb|CI103613.1|CI103613
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86431473|gb|CI085084.1|CI085084
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88966674|gb|CI365897.1|CI365897
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: GAGAAGCCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCTCTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29677489|gb|CB673764.1|CB673764
genomic: GAGAAG-CAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|8528195|gb|AU093010.1|AU093010
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAANCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCNCAAGGAATAAATTTTGGEST: gi|89196044|gb|CI395462.1|CI395462
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88907644|gb|CI090438.1|CI090438
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTGTGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29656046|gb|CB652321.1|CB652321
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCTCTTG TACGATCACCTATGGAAGCGAGCTGCCTTTAGCCCAAGGAATAAATTTTGGEST: gi|88955701|gb|CI091990.1|CI091990
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29612883|gb|CB617896.1|CB617896
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|89195196|gb|CI051309.1|CI051309
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88903571|gb|CI089109.1|CI089109
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86841365|gb|CI336388.1|CI336388
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAACCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|58691415|gb|CK080102.1|CK080102
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29668605|gb|CB664880.1|CB664880
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29667911|gb|CB664186.1|CB664186
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29623916|gb|CB628927.1|CB628927
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86506109|gb|CI148742.1|CI148742
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: AGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|15855596|gb|BI808408.1|BI808408
genomic: AGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAA-CAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29667685|gb|CB663960.1|CB663960
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29628522|gb|CB633533.1|CB633533
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29664485|gb|CB660760.1|CB660760
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|15854707|gb|BI807519.1|BI807519
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: GAGAAGCACGGGAGTGATTCGTGGAA-CAGTACATGAGGAGGGCCACTTG TACGATCCACTATGGAAGCGAGCTGCCTCTAGCACACAGGAATAAATTTTGEST: gi|33683879|gb|CF312118.1|CF312118
genomic: GAGAAGCA-GGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACA-AGGAATAAATTTTG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|86427320|gb|CI072417.1|CI072417
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29673253|gb|CB669528.1|CB669528
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29672296|gb|CB668571.1|CB668571
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|29668614|gb|CB664889.1|CB664889
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TCCGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88848589|gb|CI087111.1|CI087111
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTNGGEST: gi|29663939|gb|CB660214.1|CB660214
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|89173106|gb|CI040999.1|CI040999
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGEST: gi|88848224|gb|CI086746.1|CI086746
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
ttatgttatagttatgcatttcctgcacactaattctcaatccaaatttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGCTAGTTCGGTGGTCAAGATCGGCTGATGAACATGTTAAGCTTCATCGAC
cactaat putative branch site (score: 29)
tttctgc putative PPT
ttatagttat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tagtgtgtgttcaccatgctcgaaatactttgcatagataattctttatgttatagttatgcatttcctgcacactaattctcaatccaaatttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGCTAGTTCGGTGGTCAAGATCGGCTGATGAACATGTTAAGCTTCATCGAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - catgctc
- - - - - - - - - - - - - -ctttgca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - ttatgca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tcctgca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aatccaa