1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtaagtaaagtggtcatgaaaaataattagctcagtaagacaacaggaaaaccaaactctactgaacgagtgactgactgcgtctgtttttgccatgatgcagGGCAATGCATTTTGTGATCTTCCCGGAGACACCATGCTTCCAGGAGAAATGTAGAATCATTGTTGCGGTAACCCTGGCTTGTGTTATTTCACAGGGGTTT
species | Oryza sativa |
transcript | LOC_Os08g44810.1 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: AAGCTGAATTGCTCGCCGAGAAAAGATGCGTTGCCCATCTTACTGGAGAG GGCAATGCATTTTGTGATCTTCCCGGAGACACCATGCTTCCAGGAGAAATGEST: gi|89169357|gb|CI038366.1|CI038366
genomic: AAGCTGAATTGCTCGCCGAGAAAAGATGCGTTGCCCATCTTACTGGAGAGgtaagtaaag ... catgatgcagGGCAATGCATTTTGTGATCTTCCCGGAGACACCATGCTTCCAGGAGAAATG
EST: AAGCTGAATTGCTCGCCGAGAAAAGATGCGTTGCCCATCTTACTGGAGAG GGCAATGCATTTTGTGATCTTCCCGGAGACACCATGCTTCCAGGAGAAATGEST: gi|29613418|gb|CB618431.1|CB618431
genomic: AAGCTGAATTGCTCGCCGAGAAAAGATGCGTTGCCCATCTTACTGGAGAGgtaagtaaag ... catgatgcagGGCAATGCATTTTGTGATCTTCCCGGAGACACCATGCTTCCAGGAGAAATG
EST: AAGCTGAATTGCTCGCCGAGAAAAGATGCGTTGCCCATCTTACTGGAGAG GGCAATGCATTTTGTGATCTTCCCGGAGACACCATGCTTCCAGGAGAAATGEST: gi|29677718|gb|CB673993.1|CB673993
genomic: AAGCTGAATTGCTCGCCGAGAAAAGATGCGTTGCCCATCTTACTGGAGAGgtaagtaaag ... catgatgcagGGCAATGCATTTTGTGATCTTCCCGGAGACACCATGCTTCCAGGAGAAATG
EST: AAGCTGAATTGCTCGCCGAGAAAAGATGCGTTGCCCATCTTACTGGAGAG GGCAATGCATTTTGTGATCTTCCCGGAGACACCATGCTTCCAGGAGAAATG
genomic: AAGCTGAATTGCTCGCCGAGAAAAGATGCGTTGCCCATCTTACTGGAGAGgtaagtaaag ... catgatgcagGGCAATGCATTTTGTGATCTTCCCGGAGACACCATGCTTCCAGGAGAAATG
aaaccaaactctactgaacgagtgactgactgcgtctgtttttgccatgatgcagGGCAATGCATTTTGTGATCTTCCCGGAGACACCATGCTTCCAGGAGAAATGTAGAATCATTGTTGCGGTAACCCTGGCTTGTGTTATTTCACAGGGGTTT
gactgac putative branch site (score: 98)
tttttgcc putative PPT
tgttttt TA-rich tract