1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
gttagttttgtcgcacacatattgcatttagctaagcaggagaggtatggttagtcacttgtcttcattttgattctgtatgctctctaaacgtgttgctgccatctttcttacatctgcagGCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCAAATCTTAAGGCACAGCTTTTTAACATGCCATTTGGATATATCTTGACAC
species | Oryza sativa |
transcript | LOC_Os06g47350.2 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: AAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAG GCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCAEST: gi|58668152|gb|CK056838.1|CK056838
genomic: AAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAGgttagttttg ... acatctgcagGCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCA
EST: GGATAACAACCAAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAG GCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCAEST: gi|218504600|gb|FG967431.1|FG967431
genomic: GGATAACAACCAAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAGgttagttttg ... acatctgcagGCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCA
EST: GGATAACAACCAAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAG GCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCAEST: gi|33812524|gb|CF332150.1|CF332150
genomic: GGATAACAACCAAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAGgttagttttg ... acatctgcagGCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCA
EST: GGATAACAACCAAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAG GCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTAEST: gi|66922574|gb|CX109422.1|CX109422
genomic: GGATAACAACCAAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAGgttagttttg ... acatctgcagGCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTA
EST: GGATAACAACCAAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAG GCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCAEST: gi|29628119|gb|CB633130.1|CB633130
genomic: GGATAACAACCAAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAGgttagttttg ... acatctgcagGCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCA
EST: GGATAACAACCAAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAN GCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCAEST: gi|58668829|gb|CK057515.1|CK057515
genomic: GGATAACAACCAAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAGgttagttttg ... acatctgcagGCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCA
EST: GGATAACAACCAAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAG GCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCAEST: gi|58680790|gb|CK069477.1|CK069477
genomic: GGATAACAACCAAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAGgttagttttg ... acatctgcagGCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCA
EST: GGATAACAACCAAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAG GCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCAEST: gi|56158395|gb|AU075492.2|AU075492
genomic: GGATAACAACCAAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAGgttagttttg ... acatctgcagGCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCA
EST: AAATCATC-AAT-NTTTACGCAAGCTGTCA- GCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCAEST: gi|218492292|gb|FG954140.1|FG954140
genomic: AAATCATCAAATATTTTACGCAAGCTGTCAGgttagttttg ... acatctgcagGCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCA
EST: GGATAACAACCAAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAG GCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCA
genomic: GGATAACAACCAAGCCTATAAATCATCAAATATTTTACGCAAGCTGTCAGgttagttttg ... acatctgcagGCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCA
ttttgattctgtatgctctctaaacgtgttgctgccatctttcttacatctgcagGCAGTCATGTACATCCTGTGCTTTCGCTTAAGATCTATTATGGACTACCCAAATCTTAAGGCACAGCTTTTTAACATGCCATTTGGATATATCTTGACAC
ttcttac putative branch site (score: 91)
tctttcttacatct CT-rich tract
tttctta TA-rich tract