1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtacttatttcttcattcatttcatcttgattaaaacagcatgcatgtttagtattagcatcttgagttcttgaatcctgatacattgttcaaacttgttgctacattggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTGGAAGCTTCGAAGATGTGGAGGAGATCAAAGGGTTGTACGCTGCACAGG
species | Oryza sativa |
transcript | LOC_Os01g64660.2 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|29686739|gb|CB683014.1|CB683014
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|29621610|gb|CB626621.1|CB626621
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|86524631|gb|CI164837.1|CI164837
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTGGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88529782|gb|CI458128.1|CI458128
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88251080|gb|CI349310.1|CI349310
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|313079819|gb|HO213258.1|HO213258
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGGCCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|86844563|gb|CI338579.1|CI338579
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|86834851|gb|CI345935.1|CI345935
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|58588683|gb|CF986991.1|CF986991
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGAACTCGTTCCTAACAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88519728|gb|CI447382.1|CI447382
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88536891|gb|CI464687.1|CI464687
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|86413542|gb|CI019127.1|CI019127
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88254393|gb|CI353217.1|CI353217
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACGGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAAATATTTCTEST: gi|29688785|gb|CB685060.1|CB685060
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCC-AATATTTCT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG CCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88475867|gb|CI413138.1|CI413138
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88504770|gb|CI432276.1|CI432276
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|38476059|gb|CF960192.1|CF960192
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CAGTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88474700|gb|CI411971.1|CI411971
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88283280|gb|CI404726.1|CI404726
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGANATCCCCAATATTTCTTEST: gi|88506218|gb|CI433724.1|CI433724
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88476257|gb|CI413528.1|CI413528
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88518162|gb|CI445816.1|CI445816
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88510920|gb|CI438426.1|CI438426
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|89184643|gb|CI007068.1|CI007068
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|58031340|gb|CX728883.1|CX728883
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|33663176|gb|CF294143.1|CF294143
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88478802|gb|CI416073.1|CI416073
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|29613014|gb|CB618027.1|CB618027
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|86833721|gb|CI337295.1|CI337295
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88967746|gb|CI016261.1|CI016261
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88489575|gb|CI426847.1|CI426847
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88522820|gb|CI450613.1|CI450613
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88533107|gb|CI460643.1|CI460643
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88476483|gb|CI413754.1|CI413754
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88555841|gb|CI486127.1|CI486127
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|29617760|gb|CB622772.1|CB622772
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|33820806|gb|CF336207.1|CF336207
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|27546650|gb|CA764792.2|CA764792
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88488996|gb|CI426267.1|CI426267
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88473302|gb|CI410573.1|CI410573
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88473454|gb|CI410725.1|CI410725
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88511085|gb|CI438591.1|CI438591
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88251561|gb|CI349989.1|CI349989
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|89198621|gb|CI016706.1|CI016706
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|86874736|gb|CI318295.1|CI318295
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|29682614|gb|CB678889.1|CB678889
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88543369|gb|CI473372.1|CI473372
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88507647|gb|CI435153.1|CI435153
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: ATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88480416|gb|CI417687.1|CI417687
genomic: ATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: TTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|38476585|gb|CF960718.1|CF960718
genomic: TTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGNCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTEST: gi|88481285|gb|CI418556.1|CI418556
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
EST: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGG GCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
genomic: CATTCCTGATGGAGCAGGCTGGAGGCCAGTCTTTCACAGGCAAAGAACGGgtacttattt ... ggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTT
tgagttcttgaatcctgatacattgttcaaacttgttgctacattggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTGGAAGCTTCGAAGATGTGGAGGAGATCAAAGGGTTGTACGCTGCACAGG
tcctgat putative branch site (score: 3)
atacatt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtacttatttcttcattcatttcatcttgattaaaacagcatgcatgtttagtattagcatcttgagttcttgaatcctgatacattgttcaaacttgttgctacattggcaatgcagGCTCTTGACCTCGTTCCTACCAAGATTCACGAGAGATCCCCAATATTTCTTGGAAGCTTCGAAGATGTGGAGGAGATCAAAGGGTTGTACGCTGCACAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
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