1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
gtagctttttttaccaatgcatccaacatctttactttccaggcaatcctgtaaattttgtaactgcaatagtaaccctattttctggttcactgaagGATCTTCAAGGATGGGAAAACTATAGCAGCTGATAATGCACTGGACTATGCAGCAAACTTTTCACACATGCTTGGGTTTGATGATCCCAAAATGCTCGAG
species | Oryza sativa |
transcript | LOC_Os11g33240.3 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: GTATGTTTACCGGAG GATCTTCAAGGATGGGAAAACTATAGCAGCTGATAATGCACTGGACTATGCEST: gi|38470398|gb|CF954529.1|CF954529
genomic: GTATGTTTACCGGAGgtagcttttt ... ttcactgaagGATCTTCAAGGATGGGAAAACTATAGCAGCTGATAATGCACTGGACTATGC
EST: TTAAATTTGATAGCTCGCCTTCCACCAGTGGCTTCGTATGTTTACCGGAG GATCTTCAAGGATGGGAAAACTATAGCAGCTGATAATGCACTGGACTATGC
genomic: TTAAATTTGATAGCTCGCCTTCCACCAGTGGCTTCGTATGTTTACCGGAGgtagcttttt ... ttcactgaagGATCTTCAAGGATGGGAAAACTATAGCAGCTGATAATGCACTGGACTATGC
caatcctgtaaattttgtaactgcaatagtaaccctattttctggttcactgaagGATCTTCAAGGATGGGAAAACTATAGCAGCTGATAATGCACTGGACTATGCAGCAAACTTTTCACACATGCTTGGGTTTGATGATCCCAAAATGCTCGAG
tagtaac putative branch site (score: 1)
tgtaaattttgtaa TA-rich tract