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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagcttagttaactcctgctctagggccattgtactggtagggatagattttccgttgcttaactgttatcaattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGCAGCCTTGCATCCATGCCTGAGATTTCATTCACCATTGGAGGCAAAAAGT

Basic information

species Oryza sativa
transcript LOC_Os05g49200.2
intron # 10
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os05g49200.2 (Oryza sativa), 3'ss of exon 10
lower sequence: GRMZM2G001713_T01 (Zea mays), 3'ss of exon 7
gtgagcttagttaactcctgctctagggccattgtactggtagggatagattttccgttgcttaactgttatcaattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGCAGCCTTGCATCCATGCCTGAGATTTCATTCACCATTGGAGGCAAAAAGT
| |||||||  | ||         || | | ||    |   |   |   ||  | | |||||||||| || ||| | | | |||| || ||    || || ||||| |||||||||||| | |||||||||||||| ||||| ||||||||||| ||| | ||||||||||||||||| ||||
gcgagcttaactgacctagagcacagaggcgtttctgtaccattta-gcatgctgctttgcttaactatt-tcactatgatagCTTTGCGAGCGTCTTCCGAGTCCGATGGGAGAATCAGCCGTGGACTGTGGCAGTCTTGCGTCCATGCCTGACATTGCGTTCACCATTGGAGGCAAGAAGT

upper sequence: LOC_Os05g49200.2 (Oryza sativa), 3'ss of exon 10
lower sequence: GRMZM5G899123_T01 (Zea mays), 3'ss of exon 6
gtgagcttagttaactcctgctctagggccattgtactggtagggatagattttccgttgcttaactgttatcaattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGCAGCCTTGCATCCATGCCTGAGATTTCATTCACCATTGGAGGCAAAAAGT
| |||||||  | || |       || | | ||    |   |   |   ||  | | |||||||||| || ||| | | | |||| || ||    || || ||||| |||||||||||| | |||||||||||||| ||||| ||||||||||| ||| | ||||||||||||||||| ||||
gcgagcttaactgacccagagcacagaggcgtttctgtaccattta-gcatgctgctttgcttaactatt-tcactatgatagCTTTGCGAGCGTCTTCCGAGTCCGATGGGAGAATCAGCCGTGGACTGTGGCAGTCTTGCGTCCATGCCTGACATTGCGTTCACCATTGGAGGCAAGAAGT

upper sequence: LOC_Os05g49200.2 (Oryza sativa), 3'ss of exon 10
lower sequence: GRMZM2G065757_T02 (Zea mays), 3'ss of exon 11
gtgagcttagttaactcctgctctagggccatt--gtactggtagggatagattttccgttgcttaactgttatcaattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGCAGCCTTGCATCCATGCCTGAGATTTCATTCACCATTGGAGGCAAAAAGT
| |||||||  | || |       | |||  ||  ||||   |  | ||      | | |||||||||| || ||| | | |||||| || ||    || || ||||| |||||||||||| | |||||||||||||| ||||| ||||||||||| ||| | ||||||||||||||||| ||||
gcgagcttaactgacccagagcgcaaggcgtttctgtaccatttagcatg----ctgctttgcttaactatt-tcactatgacagCTTTGCGAGCGTCTTCCGAGTCCGATGGGAGAATCAGCCGTGGACTGTGGCAGTCTTGCGTCCATGCCTGACATTGCGTTCACCATTGGAGGCAAGAAGT

upper sequence: LOC_Os05g49200.2 (Oryza sativa), 3'ss of exon 10
lower sequence: GRMZM2G035636_T01 (Zea mays), 3'ss of exon 11
gtgagcttagttaactcctgctctagggccattgtactggtagggatagattttccgttgcttaactgttatcaattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGCAGCCTTGCATCCATGCCTGAGATTTCATTCACCATTGGAGGCAAAAAGT
| |||||||  | || |       || | | ||    |   |   |   ||  | | |||||||||| || |||   | | |||| || ||    || || ||||| |||||||||||| | |||||||||||||| ||||  ||||||||||| |||   ||||||||||||||||| ||||
gcgagcttaactgacccagagcacagaggcgtttctgtaccattta-gcatgctgctttgcttaactatt-tcaccatgatagCTTTGCGAGCGTCTTCCGAGTCCGATGGGAGAATCAGCCGTGGACTGTGGCAGTCTTGTGTCCATGCCTGACATTGTGTTCACCATTGGAGGCAAGAAGT

upper sequence: LOC_Os05g49200.2 (Oryza sativa), 3'ss of exon 10
lower sequence: GRMZM2G153977_T01 (Zea mays), 3'ss of exon 5
gtgagcttagttaactcctgctctagggccattgtactggtagggatag-attttccgttgcttaactgttatcaattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGCAGCCTTGCATCCATGCCTGAGATTTCATTCACCATTGGAGGCAAAAAGT
|||||||||    |||  ||  |  |||||||  | |||       ||| | | | |  |||||||| |||  |  |   |||||| |||||    || ||   ||| |||||||||||| | |||||||||| ||| ||||  |||||||| || ||| | ||||||||||||||||| ||||
gtgagcttaaccgacttttgagcacgggccatgtttctgtaccacttagtactctactgtgcttaaccgtt-cctttacgacagCTTTGTGAGCGTCTTCCTTCTCCCATGGGAGAATCAGCCGTGGACTGTGCCAGTCTTGGGTCCATGCCCGACATTGCGTTCACCATTGGAGGCAAGAAGT

upper sequence: LOC_Os05g49200.2 (Oryza sativa), 3'ss of exon 10
lower sequence: GRMZM2G370357_T01 (Zea mays), 3'ss of exon 9
gtgagcttagttaactcctgctctagggccattgtactggtagggatagattttccgttgcttaactgttatcaattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGCAGCCTTGCATCCATGCCTGAGATTTCATTCACCATTGGAGGCAAAAAGT
| |||||||  | || |       || | | ||    |   |   |   ||  | | |||||||||| || ||| | | | |||| || ||    || || ||||| |||||||||||| | |||||||||||||| ||||| ||||||||||| |||   ||||||||||||||||| ||||
gcgagcttaactgacccagagcacagaggcgtttctgtaccattta-gcatgctgctttgcttaactatt-tcactatgatagCTTTGCGAGCGTCTTCCGAGTCCGATGGGAGAATCAGCCGTGGACTGTGGCAGTCTTGCGTCCATGCCTGACATTGTGTTCACCATTGGAGGCAAGAAGT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|33800359|gb|CF326048.1|CF326048
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29681832|gb|CB678107.1|CB678107
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|88269534|gb|CI380832.1|CI380832
EST:     CTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: CTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|86478235|gb|CI120868.1|CI120868
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAGTCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|88955486|gb|CI091578.1|CI091578
EST:     GACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: GACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|33682906|gb|CF311145.1|CF311145
EST:     GAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: GAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|33795396|gb|CF323568.1|CF323568
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTC
EST: gi|29637769|gb|CB642778.1|CB642778
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29643319|gb|CB648326.1|CB648326
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|86886646|gb|CI312531.1|CI312531
EST:     CTTGCACAAGAACCAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: CTTGCAC-AGAA-CAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29664333|gb|CB660608.1|CB660608
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29687282|gb|CB683557.1|CB683557
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|58668482|gb|CK057168.1|CK057168
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|33683538|gb|CF311777.1|CF311777
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|88975147|gb|CI023398.1|CI023398
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29667542|gb|CB663817.1|CB663817
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|125863426|gb|EL586708.1|EL586708
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCC
EST: gi|58672644|gb|CK061330.1|CK061330
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCCAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|86420373|gb|CI056362.1|CI056362
EST:     CAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: CAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|88985444|gb|CI002961.1|CI002961
EST:     TACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|25798069|gb|CA754030.1|CA754030
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29660446|gb|CB656721.1|CB656721
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29637768|gb|CB642777.1|CB642777
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|88973976|gb|CI002638.1|CI002638
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29686812|gb|CB683087.1|CB683087
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|58668099|gb|CK056785.1|CK056785
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|8527562|gb|AU092377.1|AU092377
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|86256854|gb|CI061617.1|CI061617
EST:     CAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: CAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|89165683|gb|CI102773.1|CI102773
EST:     ATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: ATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|218483047|gb|FG954664.1|FG954664
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|86253146|gb|CI058071.1|CI058071
EST:     TACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: TACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|89186876|gb|CI053279.1|CI053279
EST:     ACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: ACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|89168760|gb|CI020841.1|CI020841
EST:     CAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: CAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|4715044|gb|AU056161.1|AU056161
EST:     AACTTNCACAGAACAAGACTCA-NATCTCATCTTGAA-TACATTAATCAG                         CTCTGTNACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29660450|gb|CB656725.1|CB656725
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29674325|gb|CB670600.1|CB670600
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|86428064|gb|CI073161.1|CI073161
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|218501795|gb|FG948052.1|FG948052
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|88992900|gb|CI035862.1|CI035862
EST:     ACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: ACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|58666355|gb|CK055041.1|CK055041
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|4714483|gb|AU058450.1|AU058450
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29627822|gb|CB632833.1|CB632833
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAATTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|58587529|gb|CF985837.1|CF985837
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|33658900|gb|CF281513.1|CF281513
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAT                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|86423176|gb|CI060749.1|CI060749
EST:     TGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: TGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29636407|gb|CB641416.1|CB641416
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29639174|gb|CB644183.1|CB644183
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|89174187|gb|CI042080.1|CI042080
EST:     TCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: TCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29643321|gb|CB648328.1|CB648328
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29675906|gb|CB672181.1|CB672181
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29677889|gb|CB674164.1|CB674164
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTTTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATTTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|88964161|gb|CI045354.1|CI045354
EST:     GGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: GGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|86250647|gb|CI003765.1|CI003765
EST:     GACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: GACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|218502286|gb|FG955722.1|FG955722
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29660990|gb|CB657265.1|CB657265
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|87031014|gb|CI270162.1|CI270162
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|218495569|gb|FG950148.1|FG950148
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29657723|gb|CB653998.1|CB653998
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|88985651|gb|CI016360.1|CI016360
EST:     CAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: CAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|89193029|gb|CI050327.1|CI050327
EST:     CACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: CACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29639940|gb|CB644949.1|CB644949
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|58592991|gb|CF991299.1|CF991299
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|88987122|gb|CI034163.1|CI034163
EST:     CTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: CTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29669083|gb|CB665358.1|CB665358
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|86251262|gb|CI055395.1|CI055395
EST:     ACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGTTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: ACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|88829221|gb|CI074091.1|CI074091
EST:     AAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|88831946|gb|CI014505.1|CI014505
EST:     AACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29642552|gb|CB647559.1|CB647559
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|88220606|gb|CI220166.1|CI220166
EST:     CTCATCTTGAACTACATTAATCAG                         CCCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: CTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|86534945|gb|CI175151.1|CI175151
EST:     AACTTGCACAGGACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|88971534|gb|CI017848.1|CI017848
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|89175447|gb|CI042468.1|CI042468
EST:     GGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: GGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|58599924|gb|CK010452.1|CK010452
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|33680890|gb|CF309129.1|CF309129
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|218503012|gb|FG962530.1|FG962530
EST:     CTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: CTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|94363004|gb|CI053165.1|CI053165
EST:     GACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: GACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|87038401|gb|CI193023.1|CI193023
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|29675129|gb|CB671404.1|CB671404
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
EST: gi|89192631|gb|CI049929.1|CI049929
EST:     AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAG                         CTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC
genomic: AACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 75 (downstream exon)
Score: 340

TGGTCCCATGTGCAATGCCTGTGAGATGGCTGTTGTATGGATGCAGAACCAACTTGCACAGAACAAGACTCAGGATCTCATCTTGAACTACATTAATCAGgtgagcttag ... aattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGCAGCCTTGCATCCATGCCTGAGATTTCATTCACCATTGGAGGCAAAAAGT




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ccattgtactggtagggatagattttccgttgcttaactgttatcaattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGCAGCCTTGCATCCATGCCTGAGATTTCATTCACCATTGGAGGCAAAAAGT
                               gcttaac  putative branch site (score: 340)
                                      tgttatcaatttta  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtgagcttagttaactcctgctctagggccattgtactggtagggatagattttccgttgcttaactgttatcaattttacagCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAATCATCTGTGGACTGTGGCAGCCTTGCATCCATGCCTGAGATTTCATTCACCATTGGAGGCAAAAAGT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAGG