1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...attgattgttataccttccaaagaataatacattgttagttacttctttgtaagccctgatattcaagatcattcattcatttaatttgtttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA
species | Oryza sativa |
transcript | LOC_Os12g26290.5 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGCGATGEST: gi|29625915|gb|CB630926.1|CB630926
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29673746|gb|CB670021.1|CB670021
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCT-------G CCA---G--CAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88406507|gb|CI599000.1|CI599000
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29627764|gb|CB632775.1|CB632775
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29673709|gb|CB669984.1|CB669984
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCT-------G CCA---G--CAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88326464|gb|CI659896.1|CI659896
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|33676616|gb|CF304855.1|CF304855
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29623660|gb|CB628671.1|CB628671
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29626272|gb|CB631283.1|CB631283
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29622413|gb|CB627424.1|CB627424
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88367577|gb|CI568349.1|CI568349
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29674051|gb|CB670326.1|CB670326
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29622490|gb|CB627501.1|CB627501
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88327757|gb|CI657801.1|CI657801
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88342941|gb|CI640274.1|CI640274
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88349484|gb|CI653763.1|CI653763
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88571735|gb|CI663108.1|CI663108
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29625519|gb|CB630530.1|CB630530
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88325711|gb|CI648155.1|CI648155
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|33675485|gb|CF303724.1|CF303724
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29625911|gb|CB630922.1|CB630922
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29625830|gb|CB630841.1|CB630841
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88337257|gb|CI629547.1|CI629547
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29626293|gb|CB631304.1|CB631304
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29679634|gb|CB675909.1|CB675909
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29623589|gb|CB628600.1|CB628600
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|33675576|gb|CF303815.1|CF303815
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88347126|gb|CI631206.1|CI631206
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88347940|gb|CI636033.1|CI636033
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88303028|gb|CI668874.1|CI668874
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29627804|gb|CB632815.1|CB632815
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88406617|gb|CI599110.1|CI599110
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88385226|gb|CI630327.1|CI630327
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29626125|gb|CB631136.1|CB631136
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88338511|gb|CI645765.1|CI645765
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29628820|gb|CB633831.1|CB633831
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29624043|gb|CB629054.1|CB629054
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29627901|gb|CB632912.1|CB632912
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|33675586|gb|CF303825.1|CF303825
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88305364|gb|CI630526.1|CI630526
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29628685|gb|CB633696.1|CB633696
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29628226|gb|CB633237.1|CB633237
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29625787|gb|CB630798.1|CB630798
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29627802|gb|CB632813.1|CB632813
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29623658|gb|CB628669.1|CB628669
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88339870|gb|CI649127.1|CI649127
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29627625|gb|CB632636.1|CB632636
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29623848|gb|CB628859.1|CB628859
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|4968860|gb|AU065764.1|AU065764
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|29622060|gb|CB627071.1|CB627071
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATCGAGCTCAGC---ACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|33675591|gb|CF303830.1|CF303830
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88345083|gb|CI628337.1|CI628337
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|88430254|gb|CI567273.1|CI567273
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGEST: gi|33676870|gb|CF305109.1|CF305109
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
EST: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAG CCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
genomic: TCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTGCCAGCAGgtaattaagc ... ttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATG
ctttgtaagccctgatattcaagatcattcattcatttaatttgtttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA
atttaat putative branch site (score: 4)
tttgttt CT-rich tract
attcattcatttaatt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| attgattgttataccttccaaagaataatacattgttagttacttctttgtaagccctgatattcaagatcattcattcatttaatttgtttgcatgtagCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG