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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaatccatcgaatcgatcccctttctgattcaatccaattccttcatctctacagtactccttaatcagtcaatcctttctgaacattcgtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGAAGACGCCGCAGATGCGGCTGATCCACGCCAGGCTTCACGCGCAGGCCCT

Basic information

species Oryza sativa
transcript LOC_Os11g02080.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os11g02080.1 (Oryza sativa), 3'ss of exon 1
lower sequence: GRMZM2G041714_T01 (Zea mays), 3'ss of exon 1
------------------------------------gtaatccatcga-atcgatcccctttctgattcaatccaattccttcatct----ct---acagtactccttaatcagtcaatcctttctgaacattcgtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGAAGACGCCGCAGATGCG-GCTGATCCACGCCAGGCTTCACGCGCAGGCCCT
                                    |  |||||        | |     ||| | |||  || |    ||||  ||    ||   || | |  |  ||            | | ||  |   || |    |||||||  |||||||  ||||||||||| | |||||||||||| | ||||||||| ||||||||  | |  | |  |  ||||    | |||||   |   | 
gtgagtcagtctcagccagcgagcgaccttgttgcagatatccacaactgctgcttagtgttccgtttccgtcgatgatcttctgctgaaactgaaactgaaaccgctagctgtctgcctgtctatgtgcgcgcgcgcgcccagGAGGCGTGTGGGCTGCGGCGGTGGGCACTTCGGTGGCGTACAGCCGGAGGAAGGCGCCGCAGCGGGGCACGGGCCTGCGCCTCA-TCCACGCCAGGATGCA

upper sequence: LOC_Os11g02080.1 (Oryza sativa), 3'ss of exon 1
lower sequence: GRMZM5G822947_T01 (Zea mays), 3'ss of exon 1
------------------gtaatccatcgaatcgatcccctttctgattcaatccaattccttcatctctac-------agtac----tccttaatcagtcaatcctttctga----acattc-----gtgtattc---agGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGAAGACGCCG-CAGATGCGGCTGATCCACGCCAGGCTTCACGCGCAGGCCCT
                  |  | | | |||| |   |  |  ||     ||   ||   ||| || | |  |        || |    ||||  |||   ||    |  ||||    |||| |     |||| | |   |||||   |||||||||||||||||||||| || ||||||||| | ||| ||| | ||||| |    ||  |    |  ||||    | |||||   |   | 
gtgagttaattaattagtggcaccgaccgaa-cacccatccatcgacagcagatcagaccctgcagcccggccggcaatggtgcgctatcctagatccaccaccgttcactgactagacatgctgcgcgtgtgtacgacagGAGCCGTGTGGGCGACGGCGGTGGGCGCGTCCGTGGCGTACAGCCGGCGGAGGGCGCCGGCGCGGGCCACGAGCCTGCGCCTCA-TCCACGCCAGGATGCA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86506118|gb|CI148751.1|CI148751
EST:     GGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|88241495|gb|CI241344.1|CI241344
EST:     GTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33824958|gb|CF338283.1|CF338283
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33828194|gb|CF339913.1|CF339913
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|55413022|gb|CV725398.1|CV725398
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33825360|gb|CF338485.1|CF338485
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|55437683|gb|CV732128.1|CV732128
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|88294305|gb|CI667279.1|CI667279
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|58597313|gb|CK007841.1|CK007841
EST:     GGGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|55433642|gb|CV729932.1|CV729932
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33828993|gb|CF340319.1|CF340319
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|87018766|gb|CI254474.1|CI254474
EST:     GAGCTCATCGGTCCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGCCTGTGGCCGACGCCGGTGGGCGCATCGGTGGCGTACGGCCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33802563|gb|CF327154.1|CF327154
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|86529569|gb|CI169775.1|CI169775
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|38478409|gb|CF962542.1|CF962542
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|88239395|gb|CI240557.1|CI240557
EST:     TCGGCGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: TCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33685856|gb|CF314095.1|CF314095
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33827965|gb|CF339797.1|CF339797
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33685410|gb|CF313649.1|CF313649
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|87031297|gb|CI261671.1|CI261671
EST:     GAGCTCATCGTTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33828028|gb|CF339828.1|CF339828
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33825292|gb|CF338450.1|CF338450
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|88372055|gb|CI641690.1|CI641690
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|88577176|gb|CI673734.1|CI673734
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33825870|gb|CF338745.1|CF338745
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|3760866|gb|C98120.1|C98120
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33825666|gb|CF338646.1|CF338646
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33826198|gb|CF338905.1|CF338905
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33685527|gb|CF313766.1|CF313766
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33826472|gb|CF339045.1|CF339045
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33826263|gb|CF338938.1|CF338938
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|55436774|gb|CV731541.1|CV731541
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGC-TANT-GGTGGCGTACGGGCGGAGG
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCA-TCGGTGGCGTACGGGCGGAGG
EST: gi|88579743|gb|CI691727.1|CI691727
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCACCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|86910724|gb|CI294757.1|CI294757
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|86416968|gb|CI030979.1|CI030979
EST:     TCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGNCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: TCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33829268|gb|CF340456.1|CF340456
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|88585944|gb|CI703619.1|CI703619
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|38478783|gb|CF962916.1|CF962916
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCGTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGG
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGC-TGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGG
EST: gi|58604089|gb|CK014617.1|CK014617
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|86519993|gb|CI160199.1|CI160199
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGCCGGTGGGCGCATCGGTGGCGTACGGCCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|55412156|gb|CV724532.1|CV724532
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33824942|gb|CF338275.1|CF338275
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33825609|gb|CF338615.1|CF338615
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33688366|gb|CF316605.1|CF316605
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33825981|gb|CF338796.1|CF338796
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|702676|gb|D48967.1|D48967
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|88302826|gb|CI668672.1|CI668672
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33824828|gb|CF338223.1|CF338223
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|7404233|gb|AU062976.2|AU062976
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33688365|gb|CF316604.1|CF316604
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33827711|gb|CF339670.1|CF339670
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33795544|gb|CF323642.1|CF323642
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|87027020|gb|CI261467.1|CI261467
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33829414|gb|CF340530.1|CF340530
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|88210537|gb|CI210386.1|CI210386
EST:     GAGCTTATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|55433167|gb|CV729620.1|CV729620
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACTGTTGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|88993152|gb|CI108780.1|CI108780
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|7332374|gb|AU085720.1|AU085720
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAG-TGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|88308332|gb|CI649547.1|CI649547
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|58600008|gb|CK010536.1|CK010536
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|88242754|gb|CI242603.1|CI242603
EST:     CTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: CTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|88207564|gb|CI207413.1|CI207413
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33825328|gb|CF338468.1|CF338468
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33829215|gb|CF340430.1|CF340430
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|88353257|gb|CI654523.1|CI654523
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|88979214|gb|CI025716.1|CI025716
EST:     CGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: CGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|88212102|gb|CI211742.1|CI211742
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGCCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33688498|gb|CF316737.1|CF316737
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|8528403|gb|AU093218.1|AU093218
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33825698|gb|CF338662.1|CF338662
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33829345|gb|CF340495.1|CF340495
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33826274|gb|CF338942.1|CF338942
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33825286|gb|CF338447.1|CF338447
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33819613|gb|CF335626.1|CF335626
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33827037|gb|CF339324.1|CF339324
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|427422|gb|D23488.1|D23488
EST:     GAGCTCATCGGTGCAGTCGTGGGTTGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGNGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33803340|gb|CF327544.1|CF327544
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33826924|gb|CF339271.1|CF339271
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCTGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33828570|gb|CF340105.1|CF340105
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|55430534|gb|CV728233.1|CV728233
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|86593157|gb|CI255619.1|CI255619
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|66922525|gb|CX109373.1|CX109373
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33687547|gb|CF315786.1|CF315786
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|86421837|gb|CI059410.1|CI059410
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|55412338|gb|CV724714.1|CV724714
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACTGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33829302|gb|CF340473.1|CF340473
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33825244|gb|CF338426.1|CF338426
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
EST: gi|33829426|gb|CF340536.1|CF340536
EST:     GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCG                         GAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA
genomic: GAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 67 (upstream exon), 75 (downstream exon)
Score: 39

ACATCCTCAGATTCAGAGTCGTCGAAAATCATCAAGAAGATGGAGCGGCTGAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTGGCCAGCATCGgtaatccatc ... gtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGAAGACGCCGCAGATGCGGCTGATCCACGCCAGGCTTCACGCGCAGGCCCT




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

catctctacagtactccttaatcagtcaatcctttctgaacattcgtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGAAGACGCCGCAGATGCGGCTGATCCACGCCAGGCTTCACGCGCAGGCCCT
               ccttaat  putative branch site (score: 39)
                 ttaatca  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaatccatcgaatcgatcccctttctgattcaatccaattccttcatctctacagtactccttaatcagtcaatcctttctgaacattcgtgtattcagGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGAAGACGCCGCAGATGCGGCTGATCCACGCCAGGCTTCACGCGCAGGCCCT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGAT