1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtccaggcaagcaaccccatctctgatccgctctactctactctactgttcctccacacaaatccatgtgatggcggatggcctcctcgcgttagttcttgtttgcttcaatttcacgctgtcacacgtacgaggtggcggtgcagGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTCGTCAAGGCGCTCGTCAGCAGCGGCCGCACG
species | Oryza sativa |
transcript | LOC_Os05g36270.3 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GTCCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTCEST: gi|88354625|gb|CI678668.1|CI678668
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTC
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GTCCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTCEST: gi|88434653|gb|CI690933.1|CI690933
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTC
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GTCCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTCEST: gi|88309089|gb|CI654708.1|CI654708
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTC
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GTCCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTCEST: gi|88575554|gb|CI669699.1|CI669699
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTC
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GTCCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCEST: gi|29670800|gb|CB667075.1|CB667075
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTC
EST: CAACAAGGCCAGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACGTCCEST: gi|29670800|gb|CB667075.1|CB667075
genomic: CAACAAGGCC-GGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAA----Cgtccaggcaa ... ggcggtg
EST: CAACAAGGCCAGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACGTCCEST: gi|29670800|gb|CB667075.1|CB667075
genomic: CAACAAGGCC-GGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAA----Cgtccaggcaa ... ggcggtg
EST: CAACAAGGCCAGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACGTCCEST: gi|88575220|gb|CI669365.1|CI669365
genomic: CAACAAGGCC-GGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAA----Cgtccaggcaa ... ggcggtg
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GTCCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGEST: gi|33683625|gb|CF311864.1|CF311864
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAG
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GTCCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTCEST: gi|88332374|gb|CI656243.1|CI656243
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTC
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GTCCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTCEST: gi|33679306|gb|CF307545.1|CF307545
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTC
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GTCCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTCEST: gi|88328095|gb|CI649896.1|CI649896
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTC
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GNTCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAEST: gi|33686898|gb|CF315137.1|CF315137
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTCCA
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACGTCCEST: gi|33686898|gb|CF315137.1|CF315137
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAA----Cgtccaggcaa ... ggcggtg
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACGTCCEST: gi|33686898|gb|CF315137.1|CF315137
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAA----Cgtccaggcaa ... ggcggtg
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACGTCCEST: gi|33693501|gb|CF321740.1|CF321740
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAA----Cgtccaggcaa ... ggcggtg
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GTCCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTCEST: gi|33684972|gb|CF313211.1|CF313211
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTC
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GTCCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTCEST: gi|29656833|gb|CB653108.1|CB653108
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTC
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACGTCCEST: gi|29656833|gb|CB653108.1|CB653108
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAA----Cgtccaggcaa ... ggcggtg
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACGTCCEST: gi|29656833|gb|CB653108.1|CB653108
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAA----Cgtccaggcaa ... ggcggtg
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACGTCCEST: gi|88592321|gb|CI710419.1|CI710419
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAA----Cgtccaggcaa ... ggcggtg
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GTCCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTCEST: gi|88329945|gb|CI652332.1|CI652332
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTC
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GTCCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTCEST: gi|29644325|gb|CB649332.1|CB649332
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTC
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACGTCCEST: gi|29644325|gb|CB649332.1|CB649332
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAA----Cgtccaggcaa ... ggcggtg
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACGTCCEST: gi|29644325|gb|CB649332.1|CB649332
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAA----Cgtccaggcaa ... ggcggtg
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACGTCCEST: gi|33688998|gb|CF317237.1|CF317237
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAA----Cgtccaggcaa ... ggcggtg
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GTCCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTCEST: gi|86877142|gb|CI311444.1|CI311444
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTC
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GTCCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTEST: gi|29663073|gb|CB659348.1|CB659348
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCT
EST: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAAC GTCCAGGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTC
genomic: TCAACAAGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGCGACACCAACgtccaggcaa ... ggcggtgcagG----G--TGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTC
ttagttcttgtttgcttcaatttcacgctgtcacacgtacgaggtggcggtgcagGGTGAGGAGCAGAAGAAGCTTGACGTGCTCTCCAACGAAGTCTTCGTCAAGGCGCTCGTCAGCAGCGGCCGCACG
ttcaattt TA-rich tract