1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
...tatgtgacattttttttgttacaattgttcaactgtgtatgacacctccttcatatacttgtgatgcttcactctaaattatattttcttattcctgcagTTTGTTGCAAGATTAACCACAGACATTGTCCAAACTTTCGGAAAATGCAATCCTGAGTTTAAGTACTCAGATTCACTGAACCCCAAGCGCTTTCTCACCA
species | Oryza sativa |
transcript | LOC_Os02g47410.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: ATGGGCTTGCCGCCCGCTCAAGCAACCTCAGCTCCGTCAGGAAGAGGCCT TTTGTTGCAAGATTAACCACAGACATTGTCCAAACTTTCGGAAAATGCAATEST: gi|29635934|gb|CB640943.1|CB640943
genomic: ATGGGCTTGCCGCCCGCTCAAGCAACCTCAGCTCCGTCAGGAAGAGGCCTgtacgtttcc ... attcctgcagTTTGTTGCAAGATTAACCACAGACATTGTCCAAACTTTCGGAAAATGCAAT
EST: ATGGGCTTGCCGCCCGCTCAAGCAACCTCAGCTCCGTCAGGAAGAGGCCT TTTGTTGCAAGATTAACCACAGACATTGTCCAAACTTTCGGAAAATGCAATEST: gi|38470825|gb|CF954956.1|CF954956
genomic: ATGGGCTTGCCGCCCGCTCAAGCAACCTCAGCTCCGTCAGGAAGAGGCCTgtacgtttcc ... attcctgcagTTTGTTGCAAGATTAACCACAGACATTGTCCAAACTTTCGGAAAATGCAAT
EST: ATGGGCTTGCCGCCCGCTCAAGCAACCTCAGCTCCGTCAGGAAGAGGCCT TTTGTTGCAAGATTAACCACAGACATTGTCCAAACTTTCGGAAAATGCAAT
genomic: ATGGGCTTGCCGCCCGCTCAAGCAACCTCAGCTCCGTCAGGAAGAGGCCTgtacgtttcc ... attcctgcagTTTGTTGCAAGATTAACCACAGACATTGTCCAAACTTTCGGAAAATGCAAT
ctccttcatatacttgtgatgcttcactctaaattatattttcttattcctgcagTTTGTTGCAAGATTAACCACAGACATTGTCCAAACTTTCGGAAAATGCAATCCTGAGTTTAAGTACTCAGATTCACTGAACCCCAAGCGCTTTCTCACCA
ctctaaa putative branch site (score: 3)
tattttcttattcct putative PPT
actctaaattatattt TA-rich tract