1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaagctgcttgcgcgcgggcggtgtgggcgccacacctctcgtcctctctgagctgcttgttcttgcttggggtttttgggggattctgatttgggacttcttctctttttctctctccgtgtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTGTTCTCCGTCCGCAACATCGGCAAGACCCTCGTCTCCAGGACCCAGGGG
species | Oryza sativa |
transcript | LOC_Os02g18550.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|58602440|gb|CK012968.1|CK012968
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88308219|gb|CI649434.1|CI649434
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88688453|gb|CI732029.1|CI732029
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGA---C CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88587179|gb|CI704908.1|CI704908
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88363507|gb|CI618068.1|CI618068
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|33802917|gb|CF327329.1|CF327329
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88673143|gb|CI727257.1|CI727257
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|4878474|gb|AU062773.1|AU062773
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88342105|gb|CI644442.1|CI644442
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88334936|gb|CI648711.1|CI648711
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|218504336|gb|FG960758.1|FG960758
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGGGAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88328472|gb|CI676680.1|CI676680
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|4878343|gb|AU062642.1|AU062642
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGNAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88338339|gb|CI655528.1|CI655528
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88670797|gb|CI724913.1|CI724913
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|218486263|gb|FG964022.1|FG964022
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|58678754|gb|CK067441.1|CK067441
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|33807193|gb|CF329477.1|CF329477
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88584886|gb|CI702472.1|CI702472
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88691110|gb|CI735189.1|CI735189
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGC---AAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88327831|gb|CI657875.1|CI657875
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|33690861|gb|CF319100.1|CF319100
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|33796645|gb|CF324190.1|CF324190
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88728960|gb|CI752470.1|CI752470
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88694134|gb|CI738172.1|CI738172
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|87006357|gb|CI293148.1|CI293148
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88675660|gb|CI729773.1|CI729773
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88669835|gb|CI723951.1|CI723951
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|218485395|gb|FG947740.1|FG947740
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|428717|gb|D24869.1|D24869
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88326139|gb|CI651194.1|CI651194
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|86887523|gb|CI294157.1|CI294157
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88670179|gb|CI724295.1|CI724295
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88691670|gb|CI733748.1|CI733748
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGA---C CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88690991|gb|CI735070.1|CI735070
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGC---AAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|33655245|gb|CF277859.1|CF277859
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGGC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88728974|gb|CI752484.1|CI752484
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|55439670|gb|CV733145.1|CV733145
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88400951|gb|CI684925.1|CI684925
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88329520|gb|CI648582.1|CI648582
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88666583|gb|CI718719.1|CI718719
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88308477|gb|CI650886.1|CI650886
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88576445|gb|CI670590.1|CI670590
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88290442|gb|CI665231.1|CI665231
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88380862|gb|CI634887.1|CI634887
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|89172597|gb|CI721656.1|CI721656
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88694873|gb|CI738911.1|CI738911
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88309215|gb|CI655223.1|CI655223
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|55437149|gb|CV731773.1|CV731773
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|58597856|gb|CK008384.1|CK008384
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCGAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88581637|gb|CI698837.1|CI698837
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88675786|gb|CI729358.1|CI729358
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGNAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|117246664|gb|CT863247.1|CT863247
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88720549|gb|CI743848.1|CI743848
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|3763663|gb|AU030415.1|AU030415
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88586796|gb|CI704514.1|CI704514
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88569521|gb|CI660696.1|CI660696
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|58677313|gb|CK066000.1|CK066000
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|58692409|gb|CK081096.1|CK081096
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|33804300|gb|CF328024.1|CF328024
genomic: GGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88336441|gb|CI643254.1|CI643254
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88335289|gb|CI650254.1|CI650254
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|1438560|gb|U60310.1|U60310
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|58599545|gb|CK010073.1|CK010073
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|568312|gb|D39155.1|D39155
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|38477786|gb|CF961919.1|CF961919
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAGGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|33692843|gb|CF321082.1|CF321082
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88688847|gb|CI732423.1|CI732423
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGC---AAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88575829|gb|CI669974.1|CI669974
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88735488|gb|CI758996.1|CI758996
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88302381|gb|CI668227.1|CI668227
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88670183|gb|CI724299.1|CI724299
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88339781|gb|CI649038.1|CI649038
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|33687682|gb|CF315921.1|CF315921
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTEST: gi|88379044|gb|CI681875.1|CI681875
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
EST: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGAC CGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
genomic: GGCAAGAACAAGAGGATCTCCAAGGGCAGGAAGGGCAGCAAGAAGAAGACgtaagctgct ... gtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGT
ttgggggattctgatttgggacttcttctctttttctctctccgtgtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTGTTCTCCGTCCGCAACATCGGCAAGACCCTCGTCTCCAGGACCCAGGGG
ttctgat putative branch site (score: 230)
cttcttctctttttct putative PPT
tcttttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagctgcttgcgcgcgggcggtgtgggcgccacacctctcgtcctctctgagctgcttgttcttgcttggggtttttgggggattctgatttgggacttcttctctttttctctctccgtgtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTGTTCTCCGTCCGCAACATCGGCAAGACCCTCGTCTCCAGGACCCAGGGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA