Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgtaaatgattcacgcctgccccagttttgctgtgtgattaaattggtaatttcattatgtgctaagaaaattccaactttttgctggttatacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCATTCATGAAGGGGAAACTTTACATTCACTTCACTGTGGAGTTTCCAGATTC

Basic information

species Glycine max
transcript GLYMA12G10150.1
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA12G10150.1 (Glycine max), 3'ss of exon 5
lower sequence: LOC_Os03g57340.1 (Oryza sativa), 3'ss of exon 5
--------------gtatgtaaatgattcacgcctgccccagttttg----ctgtgtgattaaattggtaat--ttcattatgtg--ctaagaaaattccaact--ttttgctggttataca--tgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCATTCATGAAGGGGAAACTTTACATTCACTTCACTGTGGAGTTTCCAGATTC
                |   | || |     |  |  |    |||||    |  | |||||   ||  |||   |||||| |     |||    | |    |||  | | |   || ||      |||||||||| ||||||| | || || ||||| ||||| ||||| ||| ||||||||||||||||||| || ||||| |||||| | ||||| || || || ||
gtgagtctcccttcaaagaaagatcaccatagagtagcagcattttggaaaccatctgattgtttttttaagcattcattttagaaactattttattgtttactcatatcggccgtcatcttgtcgcagATTCATTCAAGGCTGTCAACGACGAGGGCATGCCGATGTACCAGCGGCCATTCATGAAGGGGAAGCTCTACATCCACTTCTCCGTGGAATTCCCCGACTC

upper sequence: GLYMA12G10150.1 (Glycine max), 3'ss of exon 5
lower sequence: GRMZM2G056988_T04 (Zea mays), 3'ss of exon 2
----gtatgtaaatgat-tcacgcctgcc-ccagttttgctgtgtgattaaattggtaatttcattatgtgctaagaaaattccaactttttgctggttatacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCATTCATGAAGGGGAAACTTTACATTCACTTCACTGTGGAGTTTCCAGATTC
    || | |   || |  || | | |    ||    | |  | | |||    |||   ||| ||| ||   || ||  ||    | |||    | ||       |||||||| | |||||| || || ||||| || |||||||||||||||||||| ||||||||||| || || ||||| |||||| | |||||||| || || ||
gttggtgtcttggtggtaccatgtcagttgtcaacagtccaatttcattctcatggc--tttgattctgacgtatgattatgtttattttaaatttgt-------gcagATTCTTTCAAGGCAATCAACGATGAAGGCATGCCCATGTATCAGAGGCCCTTCATGAAGGGCAAGCTGTACATCCACTTCTCGGTGGAGTTCCCGGACTC

upper sequence: GLYMA12G10150.1 (Glycine max), 3'ss of exon 5
lower sequence: GRMZM2G063238_T01 (Zea mays), 3'ss of exon 8
----gtatgtaaatgat-tcacgcctgcc-ccagttttgctgtgtgattaaattggtaatttcattatgtgctaagaaaattccaactttttgctggttatacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCATTCATGAAGGGGAAACTTTACATTCACTTCACTGTGGAGTTTCCAGATTC
    || | |   || |  || | | |    ||    | |  |   |||    |||   ||| ||| ||   || ||  ||    | |||    | ||       |||||||| | |||||| || || ||||| || |||||||||||||||||||| ||||||||||| || || ||||| |||||| | |||||||| || || ||
gttggtgtcttggtggtaccatgtcagttgtcaacagtccaattccattctcatggc--tttgattctgacgtatgattatgtttattttaaatttgt-------gcagATTCTTTCAAGGCAATCAACGATGAAGGCATGCCCATGTATCAGAGGCCCTTCATGAAGGGCAAGCTGTACATCCACTTCTCGGTGGAGTTCCCGGACTC

upper sequence: GLYMA12G10150.1 (Glycine max), 3'ss of exon 5
lower sequence: GRMZM2G346863_T01 (Zea mays), 3'ss of exon 2
gtatgtaaatgattcacgcctgccccagttttgctgtgtgattaaattggtaatttcattatgtgctaagaaaattccaactttttgctggttatacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCATTCATGAAGGGGAAACTTTACATTCACTTCACTGTGGAGTTTCCAGATTC
                            || ||  || ||||||   |  |   ||| | || ||    |  ||| |  | |  ||  |    ||   ||||||||| | |||||| || || ||||| || |||||||||||||||||||| ||||||||||| || || ||||| |||||| | |||||||| || || ||
--------------------gttggtgattctgacgtatgattatgattctgccttcgtgatttg----gccaatgctcattgattattttaaatttgtgcagATTCTTTCAAGGCAATCAACGATGAAGGCATGCCCATGTATCAGAGGCCCTTCATGAAGGGCAAGCTGTACATCCACTTCTCGGTGGAGTTCCCGGACTC

upper sequence: GLYMA12G10150.1 (Glycine max), 3'ss of exon 5
lower sequence: GRMZM2G028218_T02 (Zea mays), 3'ss of exon 5
gtatgtaaatgattcacgcctgccccagttttgctgtgtgattaaattggtaatttcattatgtgctaagaaaattccaactttttgctggttatacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCATTCATGAAGGGGAAACTTTACATTCACTTCACTGTGGAGTTTCCAGATTC
                    ||    | || ||  || ||||||   |  |   ||| | || ||    |   || |  | |  ||  |    ||   ||||||||| | |||||| || || ||||| || |||||||||||||||||||| ||||||||||| || || ||||| |||||| | |||||||| || || ||
-------------------gtgggtga-ttctgacgtatgattatgattctgccttcgtgatttg----gcccatgctcattgattattttaaatttgtgcagATTCTTTCAAGGCAATCAACGATGAAGGCATGCCCATGTATCAGAGGCCCTTCATGAAGGGCAAGCTGTACATCCACTTCTCGGTGGAGTTCCCGGACTC

upper sequence: GLYMA12G10150.1 (Glycine max), 3'ss of exon 5
lower sequence: GRMZM2G029079_T01 (Zea mays), 3'ss of exon 7
gtatgtaaatgattcacgcctgccccagtttt--gctgtgtgattaaattggtaatttcattatgtgctaagaaaattccaactttttgctggttatacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCATTCATGAAGGGGAAACTTTACATTCACTTCACTGTGGAGTTTCCAGATTC
||  ||   |   |    || |   ||||| |   | ||   |||  |||  | ||  | ||  || || |   |     |   || |  |    ||   ||||||||| | |||||| || || ||||| || |||||||||||||||||||| ||||||||||| || || ||||| |||||| | |||||||| || || ||
gttggtgtcttggtggtacc-gtgtcagttgttaaccgtccaattccattc-tcatagctttg-gttctgatgtatgattatgattattttaa--atttgtgcagATTCTTTCAAGGCAATCAACGATGAAGGCATGCCCATGTATCAGAGGCCCTTCATGAAGGGCAAGCTGTACATCCACTTCTCGGTGGAGTTCCCGGACTC

upper sequence: GLYMA12G10150.1 (Glycine max), 3'ss of exon 5
lower sequence: GRMZM2G434839_T01 (Zea mays), 3'ss of exon 12
gtatgtaaatgatt-cac-gcctgcc--ccagttttgctgtgtgattaaattggtaatttcattatgtgctaagaaaattccaactttttgctggttatacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCATTCATGAAGGGGAAACTTTACATTCACTTCACTGTGGAGTTTCCAGATTC
   |  |||| |||  |  |||||        || ||  || ||||||   |  |   ||| | || ||    |  ||| |  | |  || ||    ||   ||||||||| | |||||| || || ||||| || |||||||||||||||||||| ||||| ||||| || || ||||| |||||| | ||||||||  | || ||
---taaaaattattgtatagcctggtgggtgattctgacgtatgattatgattctgccttcgtgatttg----gccaatgctcattgattactttaaatttgtgcagATTCTTTCAAGGCAATCAACGATGAAGGCATGCCCATGTATCAGAGGCCCTTCATAAAGGGCAAGCTGTACATCCACTTCTCAGTGGAGTTCTCGGACTC

upper sequence: GLYMA12G10150.1 (Glycine max), 3'ss of exon 5
lower sequence: GRMZM2G354746_T01 (Zea mays), 3'ss of exon 4
gtatgtaaatgattcacgcctgccccagttttgctgtgtgattaaattggtaatttcattatgtgctaagaaaattccaactttttgctggttatacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCATTCATGAAGGGGAAACTTTACATTCACTTCACTGTGGAGTTTCCAGATTC
                    ||    | || ||  || ||||||   |  |   ||| | || ||    |  ||| |  | |  ||  |    ||   ||||| ||| | |||| | || || ||||| || ||||||||||||||| |||| ||||||||||| || || ||||| |||||| | |||||||| || || ||
-------------------gtgggtga-ttctgacgtatgattatgattctgccttcgtgatttg----gccaatgctcattgattattttaaatttgtgcagGTTCTTTCAAGACAATCAACGATGAAGGCATGCCCATGTATCAGTGGCCCTTCATGAAGGGCAAGCTGTACATCCACTTCTCGGTGGAGTTCCCGGACTC

upper sequence: GLYMA12G10150.1 (Glycine max), 3'ss of exon 5
lower sequence: GRMZM2G134917_T01 (Zea mays), 3'ss of exon 5
gtatgtaaatgattcacgcctgccccagttttgctgtgtgattaaattggtaatttcattatgtgctaagaaaattccaactttttgctggtta-tacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCATTCATGAAGGGGAAACTTTACATTCACTTCACTGTGGAGTTTCCAGATTC
                           |  | | | ||    | ||| |    |  | |  ||      |  ||| |  ||| |||  |    |      |||||||| | |||||| || || || || || ||||||||||| |||||||| ||||||||||| || || ||||| |||||| | |||||||| || || ||
-------------------------gtgggtggatctgaacatgaat-gactctgccttggtgcatctggccaatgctcactgtttaattacgaacttgcgcagATTCTTTCAAGGCGATCAACGACGAAGGCATGCCCATGTACCAGAGGCCGTTCATGAAGGGCAAGCTGTACATCCACTTCTCGGTGGAGTTCCCGGACTC

upper sequence: GLYMA12G10150.1 (Glycine max), 3'ss of exon 5
lower sequence: GRMZM2G433854_T01 (Zea mays), 3'ss of exon 4
gtatgtaaatgattcacgcctgccccagttttgctgtgtgattaaattggtaatttcattatgtgctaagaaaattccaactttttgctggttatacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCATTCATGAAGGGGAAACTTTACATTCACTTCACTGTGGAGTTTCCAGATTC
                    ||    | || ||  || ||||||   |  |   ||| | || ||    |  ||| |  | |  ||  |    ||   ||||| ||| | |||| | || || ||||| || ||||||||||||||| |||| ||||||||||| || || ||||| |||||| | |||||||| ||  | ||
-------------------gtgggtga-ttctgacgtatgattatgattctgccttcgtgatttg----gccaatgctcattgattattttaaatttgtgcagGTTCTTTCAAGACAATCAACGATGAAGGCATGCCCATGTATCAGTGGCCCTTCATGAAGGGCAAGCTGTACATCCACTTCTCGGTGGAGTTCCCGAACTC

upper sequence: GLYMA12G10150.1 (Glycine max), 3'ss of exon 5
lower sequence: Vv06s0080g01230.t01 (Vitis vinifera), 3'ss of exon 5
------------gtatgtaaatgattcacgcctgccccagttttgctgtgtgattaaattggtaatttcattatgtgctaagaaaattccaactttttgctggttatacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCATTCATGAAGGGGAAACTTTACATTCACTTCACTGTGGAGTTTCCAGATTC
             ||| |  ||| |||    |    |  |  |  || ||||  | | ||||| |||| | | |   ||  |             |  |   ||| |  ||||||||   | |||||| || ||||| ||||||||||| || || |||||||||||||||| |||||| || ||||| || ||||  |||||||| || ||  |
gttagtaatgtcatatctctatgtttcttttcattacatggctctctctgtg--tgatttggtcatttaaatgttgactgggggg----------tgggggagttgttaatgcagATCAGTTCAAGGCAATCAATGACGAGGGAATGCCAATATACCAGAGGCCATTCATGAGGGGGAAGCTATACATCCAGTTCAACGTGGAGTTCCCGGACAC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209716969|gb|BW682293.1|BW682293
EST:     ATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: ATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|51341333|gb|CO982650.1|CO982650
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|7924029|gb|AW830091.1|AW830091
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGNGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|46492869|gb|CN472425.1|CN472425
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCC
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCC
EST: gi|214010107|gb|DB989479.1|DB989479
EST:     AGTCGTCAGCTTCTTATTAAATCAAAT-CAGGAGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: AGCCGTCAGCTTCTTATTAAATCAAATCCCGG-GGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|192310010|gb|FK000630.1|FK000630
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAAGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|208290410|gb|GE084070.1|GE084070
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAAATGCCCATG
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAA-TGCCCATG
EST: gi|17020588|gb|BM091622.1|BM091622
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|298180786|gb|HO022225.1|HO022225
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|6482545|gb|AW201802.1|AW201802
EST:     CGGGTGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: CGGG-GAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|41145975|gb|CK606186.1|CK606186
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|7233248|gb|AW568596.1|AW568596
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|209726870|gb|BW658364.1|BW658364
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|15663872|gb|BI701243.1|BI701243
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|254323742|gb|GR836081.1|GR836081
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|192310009|gb|FK000629.1|FK000629
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAAGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|213591089|gb|DB979336.1|DB979336
EST:     TTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|33389056|gb|CA852263.1|CA852263
EST:     TAGCCGTCAGCTTCTTATTAAATCAAACCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCACAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|26043871|gb|CA782202.1|CA782202
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|16342098|gb|BI967693.1|BI967693
EST:     CGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: CGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|254316171|gb|GR825980.1|GR825980
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|254315139|gb|GR830132.1|GR830132
EST:     AG-CGCTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: AGCCG-TCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|254334179|gb|GR849097.1|GR849097
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGACTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|6915378|gb|AW396908.1|AW396908
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|7686116|gb|AW756764.1|AW756764
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|213612261|gb|DB974597.1|DB974597
EST:     TAGCCGTCAGCTTCTTATTTAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAAGTTAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|58017033|gb|CX703775.1|CX703775
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|4295997|gb|AI442412.1|AI442412
EST:     TAGCCCTCAGCTTCTTATTAAATCAATTCCCGGGGAAGTTGTGAAGCCTG                         TTTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|16104851|gb|BI892591.1|BI892591
EST:     TTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|209702529|gb|BW667162.1|BW667162
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|208088653|gb|GD885691.1|GD885691
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|254343484|gb|GR857240.1|GR857240
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|254334180|gb|GR849098.1|GR849098
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGACTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|26047702|gb|CA784414.1|CA784414
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|209720217|gb|BW674557.1|BW674557
EST:     TATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|213597162|gb|DB977642.1|DB977642
EST:     TAGCCGTCAGCTTCTTATTAAATCAACGCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATACATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|22522022|gb|BU080833.1|BU080833
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|26058628|gb|CA801542.1|CA801542
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|17963941|gb|BM270684.1|BM270684
EST:     GTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: GTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|254343222|gb|GR856926.1|GR856926
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|9564113|gb|BE473622.1|BE473622
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGG-AAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAAGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|254316475|gb|GR828012.1|GR828012
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|193624358|gb|FK574294.1|FK574294
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|13787413|gb|BG650005.1|BG650005
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|17024007|gb|BM095041.1|BM095041
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|213601815|gb|DB982540.1|DB982540
EST:     AAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCACGCACCAGACAG-TA
genomic: AAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGA-GGCCA
EST: gi|7796737|gb|AW782131.1|AW782131
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATA
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATA
EST: gi|24136228|gb|BU926738.1|BU926738
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|208291372|gb|GE092914.1|GE092914
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|298184785|gb|HO029998.1|HO029998
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCCG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|254316172|gb|GR825981.1|GR825981
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|7041934|gb|AW471828.1|AW471828
EST:     CGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: CGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|7146394|gb|AW508316.1|AW508316
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|13563122|gb|BG551342.1|BG551342
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|42722963|gb|CK768862.1|CK768862
EST:     TAGCCGTCAGCTTCTTATTAAATCAGATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGGCCA
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGG-CCA
EST: gi|254317565|gb|GR826549.1|GR826549
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|11412903|gb|BF424914.1|BF424914
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|16995988|gb|BM085360.1|BM085360
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|7233050|gb|AW568401.1|AW568401
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|254317607|gb|GR826591.1|GR826591
EST:     TAG-CGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAG-CTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|254315138|gb|GR830131.1|GR830131
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|15201521|gb|BI424915.1|BI424915
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|254316476|gb|GR828013.1|GR828013
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|9899549|gb|BE608517.1|BE608517
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|8401801|gb|BE057435.1|BE057435
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACCAAG-CTATAAATGAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATAC-AAGGCTATAAATGAT
EST: gi|13788804|gb|BG651395.1|BG651395
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|42722485|gb|CK768384.1|CK768384
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|298197471|gb|HO044950.1|HO044950
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|21994749|gb|BQ786277.1|BQ786277
EST:     TGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|13788154|gb|BG650746.1|BG650746
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|6847609|gb|AW349899.1|AW349899
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|17023940|gb|BM094974.1|BM094974
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|254331942|gb|GR843685.1|GR843685
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAG-CTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|193311146|gb|FK277198.1|FK277198
EST:     AAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCC
genomic: AAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCC
EST: gi|254331285|gb|GR845864.1|GR845864
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
EST: gi|58016718|gb|CX703460.1|CX703460
EST:     TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTG                         ATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT
genomic: TAGCCGTCAGCTTCTTATTAAATCAAATCCCGGGGAAGTTGTGAAGCCTGgtatgtaaat ... atacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCAT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ggtaatttcattatgtgctaagaaaattccaactttttgctggttatacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCATTCATGAAGGGGAAACTTTACATTCACTTCACTGTGGAGTTTCCAGATTC
                  taagaaaatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtatgtaaatgattcacgcctgccccagttttgctgtgtgattaaattggtaatttcattatgtgctaagaaaattccaactttttgctggttatacatgcagATTCATACAAGGCTATAAATGATGAGGGAATGCCCATGTATCAGAGGCCATTCATGAAGGGGAAACTTTACATTCACTTCACTGTGGAGTTTCCAGATTC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG