1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtaattttgggtacattttattttaaatattttagatgctgttgacttaattgcttgaatgatttctgcaattttgcaatttaaatcataaattttgttgttgttgcagGAAGCTGGATTAATTCAAAGCCTATGAG
species | Glycine max |
transcript | GLYMA14G02530.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TCCTTCAGGCGGATGTGGATTTGTCCGAAACTTCAGTCATATAACCCTTG GAAGCTGGATTAATTCAAAGCCTATGAGEST: gi|192298820|gb|FG991041.1|FG991041
genomic: TCCTTCAGGCGGATGTGGATTTGTCCGAAACTTCAGTCATATAACCCTTGgtaattttgg ... gttgttgcagGAAGCTGGATTAATTCAAAGCCTATGAG
EST: TCCTTCAGGCGGATGTGGATTTGTCCGAAACTTCAGTCATATAACCCTTG GAAGCTGGATTAATTCAAAGCCTATGAGEST: gi|21602714|gb|BQ613045.1|BQ613045
genomic: TCCTTCAGGCGGATGTGGATTTGTCCGAAACTTCAGTCATATAACCCTTGgtaattttgg ... gttgttgcagGAAGCTGGATTAATTCAAAGCCTATGAG
EST: GAAACTTCAGTCATATAACCCTTG GAAGCTGGATTAATTCAAAGCCTATGAGEST: gi|192326942|gb|FK019219.1|FK019219
genomic: GAAACTTCAGTCATATAACCCTTGgtaattttgg ... gttgttgcagGAAGCTGGATTAATTCAAAGCCTATGAG
EST: TCCTTCAGGCGGATGTGGATTTGTCCGAAACTTCAGTCATATAACCCTTG GAAGCTGGATTAATTCAAAGCCTATGAGEST: gi|209710455|gb|BW657327.1|BW657327
genomic: TCCTTCAGGCGGATGTGGATTTGTCCGAAACTTCAGTCATATAACCCTTGgtaattttgg ... gttgttgcagGAAGCTGGATTAATTCAAAGCCTATGAG
EST: TCCTTCAGGCGGATGTGGATTTGTCCGAAACTTCAGTCATATAACCCTTG GAAGCTGGATTAATTCAAAGCCTATGAGEST: gi|209703723|gb|BW670686.1|BW670686
genomic: TCCTTCAGGCGGATGTGGATTTGTCCGAAACTTCAGTCATATAACCCTTGgtaattttgg ... gttgttgcagGAAGCTGGATTAATTCAAAGCCTATGAG
EST: TCCTTCAGGCGGATGTGGATTTGTCCGAAACTTCAGTCATATAACCCTTG GAAGCTGGATTAATTCAAAGCCTATGAG
genomic: TCCTTCAGGCGGATGTGGATTTGTCCGAAACTTCAGTCATATAACCCTTGgtaattttgg ... gttgttgcagGAAGCTGGATTAATTCAAAGCCTATGAG
ttgaatgatttctgcaattttgcaatttaaatcataaattttgttgttgttgcagGAAGCTGGATTAATTCAAAGCCTATGAG
aattttgcaatttaaa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaattttgggtacattttattttaaatattttagatgctgttgacttaattgcttgaatgatttctgcaattttgcaatttaaatcataaattttgttgttgttgcagGAAGCTGGATTAATTCAAAGCCTATGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA