1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...tattgctatacttgtattatgtttgtttgagcttgtttagttgttcctttcttcagtagccttgtattaggtgaatcttaaccttgcatactttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
species | Glycine max |
transcript | GLYMA08G43230.3 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|209708248|gb|BW678618.1|BW678618
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|120530250|gb|EH258384.1|EH258384
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|20498376|gb|BQ273306.1|BQ273306
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: ATGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|31473950|gb|CD415978.1|CD415978
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: AAGCAACAAAGTCCAAAACACTTTTGGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|209728275|gb|BW658487.1|BW658487
genomic: AAGCAACAAAGT-CAAAACACTTTT-GGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|21285679|gb|BQ473550.1|BQ473550
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|298165006|gb|HO011055.1|HO011055
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|208064645|gb|GD865921.1|GD865921
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: CAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|13180762|gb|BG352102.1|BG352102
genomic: CAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|208156781|gb|GD957287.1|GD957287
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: CATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|20207929|gb|BQ134018.1|BQ134018
genomic: CATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: TGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTNTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|298163042|gb|HO011775.1|HO011775
genomic: TGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTT-TTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|298179673|gb|HO024888.1|HO024888
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|193664931|gb|FK610891.1|FK610891
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: GGGCATTTGCAAAGCAACAAAGTCAAAACAC-TTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|20449854|gb|BQ253978.1|BQ253978
genomic: GGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: TGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGEST: gi|15664325|gb|BI701696.1|BI701696
genomic: TGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTT-GGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAG
EST: ATGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|193353738|gb|FK319422.1|FK319422
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: GGGCATTTGTCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|10843789|gb|BF067045.1|BF067045
genomic: GGGCATTTG-CAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: ATGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGEST: gi|209705383|gb|BW668013.1|BW668013
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGG
EST: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|7926422|gb|AW832448.1|AW832448
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|207845177|gb|GD816202.1|GD816202
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: CATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|21993868|gb|BQ785396.1|BQ785396
genomic: CATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|15337855|gb|BI498511.1|BI498511
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: ATGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|17401932|gb|BM178714.1|BM178714
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: ATGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGEST: gi|15285565|gb|BI469456.1|BI469456
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
EST: ATGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGGTAEST: gi|20207556|gb|BQ133645.1|BQ133645
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAGGTA
EST: ATGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGG GTGGAGTTCCAAATCTGG
genomic: GTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACACTTTTGGgtatattttt ... ctttatgcagGTGGAGTTCCAAATCTGG
cctttcttcagtagccttgtattaggtgaatcttaaccttgcatactttatgcagGTGGAGTTCCAAATCTGGCCATGGTCCAGAGTGTGGACAATCAGAAG
tcttaac putative branch site (score: 2)
atactttat TA-rich tract