1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...tgcttatattaatatctaatcatttttccttctatgaagtatattttgatgttggtgctaaaatcaacattttgttgattttttcattgcatgctgcagaTGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTAACATTGTCACATTCTCAGCGG
species | Glycine max |
transcript | GLYMA18G12440.1 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: TGATGGTAAACTCATAACTGTGGTTTCTGCTCCAAATTACTGTGACCAGA TGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATNTGAAACCTAEST: gi|58017779|gb|CX704521.1|CX704521
genomic: TGATGGTAAACTCATAACTGTGTTTTCTGCTCCAAATTACTGTGACCAGGtaacacatat ... atgctgcagaTGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTA
EST: TGATGGTAAACTCATAACTGTGTTTTCTGCTCCAAATTACTGTGACCAGA TGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTAEST: gi|22929012|gb|BU546151.1|BU546151
genomic: TGATGGTAAACTCATAACTGTGTTTTCTGCTCCAAATTACTGTGACCAGGtaacacatat ... atgctgcagaTGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTA
EST: TGATGGTAAACTCATAACTGTGTTTTCTGCTCCAAATTACTGTGACCAGA TGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTAEST: gi|58024761|gb|CX711502.1|CX711502
genomic: TGATGGTAAACTCATAACTGTGTTTTCTGCTCCAAATTACTGTGACCAGGtaacacatat ... atgctgcagaTGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTA
EST: TGATGGTAAACTCATAACTGTGTTTTCTGCTCCAAATTACTGTGACCAGA TGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTAEST: gi|23730805|gb|BU763508.1|BU763508
genomic: TGATGGTAAACTCATAACTGTGTTTTCTGCTCCAAATTACTGTGACCAGGtaacacatat ... atgctgcagaTGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTA
EST: TGATGGTAAACTCATAACTGTGTTTTCTGCTCCAAATTACTGTGACCAGA TGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTAEST: gi|58021121|gb|CX707863.1|CX707863
genomic: TGATGGTAAACTCATAACTGTGTTTTCTGCTCCAAATTACTGTGACCAGGtaacacatat ... atgctgcagaTGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTA
EST: TGATGGTAAACTCATAACTGTGTTTTCTGCTCCAAATTACTGTGACCAGA TGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTA
genomic: TGATGGTAAACTCATAACTGTGTTTTCTGCTCCAAATTACTGTGACCAGGtaacacatat ... atgctgcagaTGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTA
ttgatgttggtgctaaaatcaacattttgttgattttttcattgcatgctgcagaTGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTAACATTGTCACATTCTCAGCGG
attttgttgatttttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tgcttatattaatatctaatcatttttccttctatgaagtatattttgatgttggtgctaaaatcaacattttgttgattttttcattgcatgctgcagaTGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTAACATTGTCACATTCTCAGCGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
tgcttat
- - - - - - - - - - - - - -ccttcta
- - - - - - - - - - - - - - - - - - - - - - - - - gttggtg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - atcaaca