Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|192295805|gb|FG992616.1|FG992616EST: AGCAGTTTTCTCACACTTCACCGCTGCTTCCCCTTCACCTCCGATTTCG- -T---TAGTCAGAGATCAAAATGTCTCGAAGATATGACAGCCGTACAACAA
genomic: AGCAGTTTTCTCACACTTCACCGCTGCTTCCCCTTCACCTCTGATTTCGTgtaagttatt ... cttttcatagATCAGTAGTCAGAGATCAAAATGTCTCGAAGATATGACAGCCGTACAACAA
EST:
gi|7042316|gb|AW472210.1|AW472210EST: CCTTCACCTCCGATTTCGT ATCAGTAGTCAGAGATCAAAATGTCTCGAAGATATGACAGCCGTACAACAA
genomic: CCTTCACCTCTGATTTCGTgtaagttatt ... cttttcatagATCAGTAGTCAGAGATCAAAATGTCTCGAAGATATGACAGCCGTACAACAA
EST:
gi|19053757|gb|BM732424.1|BM732424EST: AGCAGTTTTCTCACACTTCACCGCTGCTTCCCCTTCACCTCCGATTTCGT ATCAGTAGTCAGAGATCAAAATGTCTCGAAGATATGACAGCCGTACAACAA
genomic: AGCAGTTTTCTCACACTTCACCGCTGCTTCCCCTTCACCTCTGATTTCGTgtaagttatt ... cttttcatagATCAGTAGTCAGAGATCAAAATGTCTCGAAGATATGACAGCCGTACAACAA
EST:
gi|6724697|gb|AW309030.1|AW309030EST: TTTTCTCACACTTCACCGCTGCTTCCCCTTCACCTCCGATTTCG- -T---TAGTCAGAGATCAAAATGTCTCGAAGATATGACAGCCGTACAACAA
genomic: TTTTCTCACACTTCACCGCTGCTTCCCCTTCACCTCTGATTTCGTgtaagttatt ... cttttcatagATCAGTAGTCAGAGATCAAAATGTCTCGAAGATATGACAGCCGTACAACAA
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.aagtaggaaatacctgtttaatttctttcattttcatttttgctacttttcatagATCAGTAGTCAGAGATCAAAATGTCTCGAAGATATGACAGCCGTACAACAATCTTCTCCCCTGAAGGACGTCTTTACCAAGTGGAATATGCAATGGAGGC
gtttaat putative branch site (score: 4)
tttctttcattttcat CT-rich tract
tgtttaatttctttca TA-rich tract