1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gtaacttgtctgcagaaattctttctaaatactgtccttctcctttggttattgagttattggttttatctctctttagGTAGTGGAAGTGGTGAGTGGGGATTGTCTAATAGTTGCCGATGATGCTGTTCCATTTGGGAGTCCAGCAGCAGAGAGACGGGTCTGTCTTTCGAGTATCA
species | Arabidopsis thaliana |
transcript | AT5G07350.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CTCCAGCTACAAACTCTAAGGCAATTCATGACCAGAACTTTACGGGAAAG GTAGTGGAAGTGGTGAGTGGGGATTGTCTAATAGTTGCCGAEST: gi|116439364|gb|EG481956.1|EG481956
genomic: CTCCAGCTACAAACTCTAAGGCAATTCATGACCAGAACTTTACGGGAAAGgtaacttgtc ... ctctctttagGTAGTGGAAGTGGTGAGTGGGGATTGTCTAATAGTTGCCGA
EST: CTCCAGCTACAAACTCTAAGGCAATTCATGACCAGAACTTTACGGGAAAG GTAGTGGAAGTGGTGAGTGGGGATTGTCTAATAGTTGCCGATGATGCTGTTEST: gi|116439363|gb|EG481955.1|EG481955
genomic: CTCCAGCTACAAACTCTAAGGCAATTCATGACCAGAACTTTACGGGAAAGgtaacttgtc ... ctctctttagGTAGTGGAAGTGGTGAGTGGGGATTGTCTAATAGTTGCCGATGATGCTGTT
EST: CTCCAGCTACAAACTCTAAGGCAATTCATGACCAGAACTTTACGGGAAAG GTAGTGGAAGTGGTGAGTGGGGATTGTCTAATAGTTGCCGATGATGCTGTT
genomic: CTCCAGCTACAAACTCTAAGGCAATTCATGACCAGAACTTTACGGGAAAGgtaacttgtc ... ctctctttagGTAGTGGAAGTGGTGAGTGGGGATTGTCTAATAGTTGCCGATGATGCTGTT
ctaaatactgtccttctcctttggttattgagttattggttttatctctctttagGTAGTGGAAGTGGTGAGTGGGGATTGTCTAATAGTTGCCGATGATGCTGTTCCATTTGGGAGTCCAGCAGCAGAGAGACGGGTCTGTCTTTCGAGTATCA
ttctaaa putative branch site (score: 2)
ttttatctctcttt putative PPT
ttttatct TA-rich tract