1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtaagtctgctttattacggccaggtaaagattattttaccgtaacaccagtgtgatgatcttcctgtgctttttgttccttacagATTTCAACTTTGCCAACTCAATCGTCAAGTAGTCCCAAGGGTGAGAGCTTAAACGGTTATACATTTTTCTGGGGAGGTCTCGTTAGGATTGACATCTTGA
species | Arabidopsis thaliana |
transcript | AT3G47450.2 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: ATTTACCCGCCCTTGCTCCTCAAAATCGTCTCAGAGGCCAATCTTTCGAT ATTTCAACTTTGCCAACTCAATCGTCAAGTAGTCCCAAGGGTGAGAGCTTA
genomic: ATTTACCCGCCCTTGCTCCTCAAAATCGTCTCAGAGGCCAATCTTTCGATgtaagtctgc ... ttccttacagATTTCAACTTTGCCAACTCAATCGTCAAGTAGTCCCAAGGGTGAGAGCTTA
ttattttaccgtaacaccagtgtgatgatcttcctgtgctttttgttccttacagATTTCAACTTTGCCAACTCAATCGTCAAGTAGTCCCAAGGGTGAGAGCTTAAACGGTTATACATTTTTCTGGGGAGGTCTCGTTAGGATTGACATCTTGA
ccgtaac putative branch site (score: 3)
tcttcctgtgcttttt putative PPT
tttttgtt TA-rich tract