1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gttctagattttaacccaagtcctgtttttctcaatctttgttttatgtccatttcatttgatctcttatatattctcagCAATGCAGTATAAATTATCCAAACAATGGGCCATTACCTCCAGACGCTCCTTCTTGGTGTCAAGCGCCTTTTGACCCCGAAGGCCTCTTAAG
species | Arabidopsis thaliana |
transcript | AT5G47900.7 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: TTCTAGGAATCCAACATTTGTGCGGAAAACCTGTATATGCACGAACCAAG CAATGCAGTATAAATTATCCAAACAAEST: gi|116435479|gb|EG478071.1|EG478071
genomic: TTCTAGGAATCCAGCATTTGTACAGAAAACCTGTATATGCACGAACCAAGgttctagatt ... atattctcagCAATGCAGTATAAATTATCCAAACAA
EST: TTCTAGGAATCCAGCATTTGTACAGAAAACCTGTATATGCACGAACCAAG CAATGCAGTATAAATTATCCAAACAATGGGCCA
genomic: TTCTAGGAATCCAGCATTTGTACAGAAAACCTGTATATGCACGAACCAAGgttctagatt ... atattctcagCAATGCAGTATAAATTATCCAAACAATGGGCCA
tttttctcaatctttgttttatgtccatttcatttgatctcttatatattctcagCAATGCAGTATAAATTATCCAAACAATGGGCCATTACCTCCAGACGCTCCTTCTTGGTGTCAAGCGCCTTTTGACCCCGAAGGCCTCTTAAG
atttgat putative branch site (score: 5)
tattctc putative PPT
aatctttgttttat TA-rich tract