1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgacttttccctagacttcaaagttcaattgtttgtttgtgtttgcttttatgtattagtgtaccttttgttcaagtaaaacctgcatcttaaacaaagtttgtttgttaatcatattgacactataatttccacaatgttagGCAACAGTGAGGCAACCAGTTGTTAAAAACATGATGAAGGCTCTATACTTTCAATTCACAGCGGGTGTTTTACCGATGTACGCAGTTACATTCATCGGAT
species | Arabidopsis thaliana |
transcript | AT2G39890.2 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: CCGCAAATCTGGTTTTCGCATTCAACACCGGGATGCTTCCAGAAATTCAC GCAACAGTGAGGCAACCAGTTGTTAAAAACATGATGAAGGCTCTATACTTT
genomic: CCGCAAATCTGGTTTTCGCATTCAACACCGGGATGCTTCCAGAAATTCAGgtgacttttc ... acaatgttagGCAACAGTGAGGCAACCAGTTGTTAAAAACATGATGAAGGCTCTATACTTT
cttaaacaaagtttgtttgttaatcatattgacactataatttccacaatgttagGCAACAGTGAGGCAACCAGTTGTTAAAAACATGATGAAGGCTCTATACTTTCAATTCACAGCGGGTGTTTTACCGATGTACGCAGTTACATTCATCGGAT
tattgac putative branch site (score: 2)
tttccac putative PPT
tttgttaatcatatt TA-rich tract