1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtagagaactcgtatcgattattggttacagtaagtgcattgtgttgtatacaaactatttcctaatggtgttcacatgtgggtttagGTTAGCAAACCTCTTCTGGAGACATCAAGGAAAGGCTATCTCGCTGCTATCTCTGCTTCGAGTTACTCCTTTGTTTCCTTGCTGAGGCATTTTCTGCCAA
species | Arabidopsis thaliana |
transcript | AT2G05990.2 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GCAAATGGTCCAGAG GTTAGCAAACCTCTTCTGGAGACATCAAGGAAAGGCTATCTCGCTGCTATCEST: gi|47829300|gb|CK118984.1|CK118984
genomic: GCAAATGGCCCAGAGgtagagaact ... gtgggtttagGTTAGCAAACCTCTTCTGGAGACATCAAGGAAAGGCTATCTCGCTGCTATC
EST: ATTTTGGAAGCATTGACATTCTTGTCCATTCCCTTGCAAATGGCCCAGAG GTTAGCAAACCTCTTCTGGAGACATCAAGGAAAGGCTATCTCGCTGCTATCEST: gi|124788998|gb|EH878677.1|EH878677
genomic: ATTTTGGAAGCATTGACATTCTTGTCCATTCCCTTGCAAATGGCCCAGAGgtagagaact ... gtgggtttagGTTAGCAAACCTCTTCTGGAGACATCAAGGAAAGGCTATCTCGCTGCTATC
EST: ATTTTGGAAGCATTGACATTCTTGTCCATTCCCTTGCAAATGGCCCAGAG GTTAGCAAACCTCTTCTGGAG
genomic: ATTTTGGAAGCATTGACATTCTTGTCCATTCCCTTGCAAATGGCCCAGAGgtagagaact ... gtgggtttagGTTAGCAAACCTCTTCTGGAG
agtgcattgtgttgtatacaaactatttcctaatggtgttcacatgtgggtttagGTTAGCAAACCTCTTCTGGAGACATCAAGGAAAGGCTATCTCGCTGCTATCTCTGCTTCGAGTTACTCCTTTGTTTCCTTGCTGAGGCATTTTCTGCCAA
tcctaat putative branch site (score: 2)
tatacaaactattt TA-rich tract