1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtattgcatggctagacaccttgttgtagtagcctttgcaaaaacccttattgttccgactttgtctgacatttgaacatatgtaaaaaagTGTTACATGAAGCAACTGCTGACTGGGCTTCACTATTGTCATGTGAATCAAGTGCTTCACCGTGATATAAAAG
species | Arabidopsis thaliana |
transcript | AT5G64960.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: CCTGGACTGAGATTTACGGTTCCTCAGANAAAG TGTTACATGAAGCAACTGCTGACTGGGCTTCACTATTGTCATGTGAATCAAEST: gi|164005784|gb|ES007546.1|ES007546
genomic: CCTGGACTGAGATTTACGGTTCCTCAGATAAAGgtattgcatg ... tgtaaaaaagTGTTACATGAAGCAACTGCTGACTGGGCTTCACTATTGTCATGTGAATCAA
EST: TGGACTTGCTGATCGTCCTGGACTGAGATTTACGGTTCCTCAGAATAAAG TGTTACATGAAGCAACTGCTGACTGGGCTTCACTATTGEST: gi|164179696|gb|ES010118.1|ES010118
genomic: TGGACTTGCTGATCGTCCTGGACTGAGATTTACGGTTCCTCAGA-TAAAGgtattgcatg ... tgtaaaaaagTGTTACATGAAGCAACTGCTGACTGGGCTTCACTATTG
EST: CTGGACTTGCTGATCGTCCTGGACTGAGATTTACGGTTCCTCAGATAAAG TGTTACATGAAGCAACTGCTGACTGGGCTTCACTATTGEST: gi|86059280|gb|DR355037.1|DR355037
genomic: CTGGACTTGCTGATCGTCCTGGACTGAGATTTACGGTTCCTCAGATAAAGgtattgcatg ... tgtaaaaaagTGTTACATGAAGCAACTGCTGACTGGGCTTCACTATTG
EST: CTGGACTTGCTGATCGTCCTGGACTGAGATTTACGGTTCCTCAGATAAAG TGTTACATGAAGCAACTGCTGACTGGGCTTCACTATTGTCATGTGAATCAAEST: gi|86059279|gb|DR355036.1|DR355036
genomic: CTGGACTTGCTGATCGTCCTGGACTGAGATTTACGGTTCCTCAGATAAAGgtattgcatg ... tgtaaaaaagTGTTACATGAAGCAACTGCTGACTGGGCTTCACTATTGTCATGTGAATCAA
EST: CTGGACTTGCTGATCGTCCTGGACTGAGATTTACGGTTCCTCAGATAAAG TGTTACATGAAGCAACTGCTGACTGGGCTTCACTATTGTCATGTGAATCAAEST: gi|47829487|gb|CK119171.1|CK119171
genomic: CTGGACTTGCTGATCGTCCTGGACTGAGATTTACGGTTCCTCAGATAAAGgtattgcatg ... tgtaaaaaagTGTTACATGAAGCAACTGCTGACTGGGCTTCACTATTGTCATGTGAATCAA
EST: CTGGACTTGCTGATCGTCCTGGACTGAGATTTACGGTTCCTCAGATAAAG TGTTACATGAAGCAACTGCTGACTGGGCTTCACTATTGTCATGTGAATCAA
genomic: CTGGACTTGCTGATCGTCCTGGACTGAGATTTACGGTTCCTCAGATAAAGgtattgcatg ... tgtaaaaaagTGTTACATGAAGCAACTGCTGACTGGGCTTCACTATTGTCATGTGAATCAA
tgcaaaaacccttattgttccgactttgtctgacatttgaacatatgtaaaaaagTGTTACATGAAGCAACTGCTGACTGGGCTTCACTATTGTCATGTGAATCAAGTGCTTCACCGTGATATAAAAG
gtctgac putative branch site (score: 3)
aacatatgtaaaaaa TA-rich tract