1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtactagatttcacacctatatgtgattgtatgcaatatatttgcatacatatgattgacaatttccattttgtagCTTGCTCTTAAAGCCGGTGTTTTCTATGACAAAGTGTCTAATATGACCATATGGGGAAATCACTCCACGACTCAG
species | Arabidopsis thaliana |
transcript | AT5G58330.2 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TAGACGAAAATCGTGCCAAATGCCAG CTTGCTCTTAAAGCCGGTGTTTTCTATGACAAAGTGTCTAATATGACCATAEST: gi|124934868|gb|EL011900.1|EL011900
genomic: TAGACGAAAATCGTGCCAAATGCCAGgtactagatt ... cattttgtagCTTGCTCTTAAAGCCGGTGTTTTCTATGACAAAGTGTCTAATATGACCATA
EST: GAAAATCGTGCCAAATGCCAG CTTGCTCTTAAAGCCGGTGTTTTCTATGACAAAGTGTCTAATATGACCATAEST: gi|116454058|gb|EG496650.1|EG496650
genomic: GAAAATCGTGCCAAATGCCAGgtactagatt ... cattttgtagCTTGCTCTTAAAGCCGGTGTTTTCTATGACAAAGTGTCTAATATGACCATA
EST: AGAACTTCCATGCCCTCACGAGGTTAGACGAAAATCGTGCCAAATGCCAG CTTGCTCTTAAAGCCGGTGTTTTCTATGACAAAGTGTCTAATATGACCATAEST: gi|124722366|gb|EH813768.1|EH813768
genomic: AGAACTTCCATGCCCTCACGAGGTTAGACGAAAATCGTGCCAAATGCCAGgtactagatt ... cattttgtagCTTGCTCTTAAAGCCGGTGTTTTCTATGACAAAGTGTCTAATATGACCATA
EST: CATGCCCTCACGAGGTTAGACGAAAATCGTGCCAAATGCCAG CTTGCTCTTAAAGCCGGTGTTTTCTATGACAAAGTGTCTAATATGACCATA
genomic: CATGCCCTCACGAGGTTAGACGAAAATCGTGCCAAATGCCAGgtactagatt ... cattttgtagCTTGCTCTTAAAGCCGGTGTTTTCTATGACAAAGTGTCTAATATGACCATA
tgtgattgtatgcaatatatttgcatacatatgattgacaatttccattttgtagCTTGCTCTTAAAGCCGGTGTTTTCTATGACAAAGTGTCTAATATGACCATATGGGGAAATCACTCCACGACTCAG
gattgac putative branch site (score: 3)
tttccatttt putative PPT
tatgcaatatattt TA-rich tract