1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtatagttatttcatttgctttagatgatatgtagagtcacaaaagatcactataacttatagtacatttgtttaaaaagGTTCAAGACTGAGGAATACTCTCACACGGCGGTGAACAAGTTCAATGTGATGCCTGATTCTATACCCGAGTGGGTTTTCGACTTCATGCCTCTCCGTGGA
species | Arabidopsis thaliana |
transcript | AT1G35580.3 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CTTGATCATCAGAACCTCAATGACATTTACAG GTTCAAGACTGAGGAATACTCTCACACGGCGGTGAACAAGTTCAATGTGATEST: gi|124824609|gb|EH909475.1|EH909475
genomic: CTTGATCATCAGAACCTCAATGACATTTACAGgtatagttat ... gtttaaaaagGTTCAAGACTGAGGAATACTCTCACACGGCGGTGAACAAGTTCAATGTGAT
EST: TGCGCAATTACTTCTGGCTTGATCATCAGAACCTCAATGACATTTACAG GTTCAAGACTGAGGAATACTCTCACACGGCGGTGAACAAGTTCAATEST: gi|124810778|gb|EH895644.1|EH895644
genomic: TGCGCAATTACTTCTGGCTTGATCATCAGAACCTCAATGACATTTACAGgtatagttat ... gtttaaaaagGTTCAAGACTGAGGAATACTCTCACACGGCGGTGAACAAGTTCAAT
EST: TGACATTTACAG GTTCAAGACTGAGGAATACTCTCACACGGCGGTGAACAAGTTCAATGTGATEST: gi|124784960|gb|EH874639.1|EH874639
genomic: TGACATTTACAGgtatagttat ... gtttaaaaagGTTCAAGACTGAGGAATACTCTCACACGGCGGTGAACAAGTTCAATGTGAT
EST: CTTGATCATCAGAACCTCAATGACATTTACAG GTTCAAGACTGAGGAATACTCTCACACGGCGGTGAACAAGTTCAATGTGATEST: gi|125129375|gb|EL173182.1|EL173182
genomic: CTTGATCATCAGAACCTCAATGACATTTACAGgtatagttat ... gtttaaaaagGTTCAAGACTGAGGAATACTCTCACACGGCGGTGAACAAGTTCAATGTGAT
EST: ATCAGAACCTCAATGACATTTACAG GTTCAAGACTGAGGAATACTCTCACACGGCGGTGAACAAGTTCAATGTGATEST: gi|124913116|gb|EH986990.1|EH986990
genomic: ATCAGAACCTCAATGACATTTACAGgtatagttat ... gtttaaaaagGTTCAAGACTGAGGAATACTCTCACACGGCGGTGAACAAGTTCAATGTGAT
EST: CAATTACTTCTGGCTTGATCATCAAGAACCTCAATGACATTTACAG GTTCAAGACTGAGGAATACTCTCACACGGCGGTGAACAAGTTCAAEST: gi|125041871|gb|EL114140.1|EL114140
genomic: CAATTACTTCTGGCTTGATCATC-AGAACCTCAATGACATTTACAGgtatagttat ... gtttaaaaagGTTCAAGACTGAGGAATACTCTCACACGGCGGTGAACAAGTTCAA
EST: CTTCTGGCTTGATCATCAGAACCTCAATGACATTTACAG GTTCAAGACTGAGGAATACTCTCACACGGCGGTGAACAAGTTCAATGTGAG
genomic: CTTCTGGCTTGATCATCAGAACCTCAATGACATTTACAGgtatagttat ... gtttaaaaagGTTCAAGACTGAGGAATACTCTCACACGGCGGTGAACAAGTTCAATGTGAT
tgatatgtagagtcacaaaagatcactataacttatagtacatttgtttaaaaagGTTCAAGACTGAGGAATACTCTCACACGGCGGTGAACAAGTTCAATGTGATGCCTGATTCTATACCCGAGTGGGTTTTCGACTTCATGCCTCTCCGTGGA
ctataac putative branch site (score: 3)
tttgttt putative PPT
tataacttatagtaca TA-rich tract