1 5' 3' | 2 5' 3' | 3 5' 3' |
gtaagcttttctctaattgtactttcaactagaatcaacatttactgtttcaaaacaaaaaatcaccatttactgtttaaaaaaaccttagtttaacgtggggttgttttggttactcagTTTTTACGTAGACGATGTGCCAATAAGAGAATACAAAAACAACGAAGCCAAGAACATAGCTTACCCAACATCACAACCTATGGGAGTATACTCAACATTA
species | Arabidopsis thaliana |
transcript | AT5G65730.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TCTATGGATTACCACACTTACACTATCTTATGGTCACACAAACACATTGT TTTTT-CGTAGACGATGTGCCAATAAGAGAATACEST: gi|125088476|gb|EL147217.1|EL147217
genomic: TCTATGGATTACCACACTTACACTATCTTATGGTCACACAAACACATTGTgtaagctttt ... ggttactcagTTTTTACGTAGACGATGTGCCAATAAGAGAATAC
EST: CTATGGATTACCACACTTACACTATCTTATGGTCACACAAACACATTTGT TTTTTACGTAGACGATEST: gi|124818759|gb|EH903625.1|EH903625
genomic: CTATGGATTACCACACTTACACTATCTTATGGTCACACAAACACATT-GTgtaagctttt ... ggttactcagTTTTTACGTAGACGAT
EST: TCTATGGATTACCACACTTACACTATCTTATGGTCACACAAACACATTGT TTTTTACGTAGACGATGTGCCAATAAGAGAATACEST: gi|125049737|gb|EL122006.1|EL122006
genomic: TCTATGGATTACCACACTTACACTATCTTATGGTCACACAAACACATTGTgtaagctttt ... ggttactcagTTTTTACGTAGACGATGTGCCAATAAGAGAATAC
EST: TCTATGGATTACCACACTTACACTATCTTATGGTCACACAAACACATTGT TTTT-ACGTAGACGA
genomic: TCTATGGATTACCACACTTACACTATCTTATGGTCACACAAACACATTGTgtaagctttt ... ggttactcagTTTTTACGTAGACGA
ccatttactgtttaaaaaaaccttagtttaacgtggggttgttttggttactcagTTTTTACGTAGACGATGTGCCAATAAGAGAATACAAAAACAACGAAGCCAAGAACATAGCTTACCCAACATCACAACCTATGGGAGTATACTCAACATTA
gtttaac putative branch site (score: 3)
tttaaaaaaaccttag TA-rich tract