1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gttcgcaaactactcttttagattccaatcattttctgattctgcatcaggcataatgacatgttcttcaaatgcagGTCTGTACAGTGGTCTTGGATCGTTAACTTTAGGAAGAATTTCTGGTTTTGGTGCAAGGTTTGGTGTCTATGAGATTCTAACAGCTTTCTACAAAG
species | Arabidopsis thaliana |
transcript | AT4G15010.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AAGCTCCTTTCAAGTTTTTAATAGAGTTCTTCGATTCTCTGGCTATTCAG GTCTGTACAGTGGTCTTGGATCGTTAACTTTAGGAAGAATTTCTGGTTTTGEST: gi|116399032|gb|EG441624.1|EG441624
genomic: AAGCTCCTTTCAAGTTTTTAATAGAGTTCTTCGATTCTCTGGCTATTCAGgttcgcaaac ... tcaaatgcagGTCTGTACAGTGGTCTTGGATCGTTAACTTTAGGAAGAATTTCTGGTTTTG
EST: AAGCTCCTTTCAAGTTTTTAATAGAGTTCTTCGATTCTCTGGCTATTCAG GTCTGTACAGTGGTCTTGGATCGTTAACTTTAGGAAGAATTTCTGGTTTTGEST: gi|116399034|gb|EG441626.1|EG441626
genomic: AAGCTCCTTTCAAGTTTTTAATAGAGTTCTTCGATTCTCTGGCTATTCAGgttcgcaaac ... tcaaatgcagGTCTGTACAGTGGTCTTGGATCGTTAACTTTAGGAAGAATTTCTGGTTTTG
EST: AAGCTCCTTTCAAGTTTTTAATAGAGTTCTTCGATTCTCTGGCTATTCAG GTCTGTACAGTGGTCTTGGATCGTTAACTTTAGGAAGAATTTCTGGTTTTGEST: gi|86070446|gb|DR366203.1|DR366203
genomic: AAGCTCCTTTCAAGTTTTTAATAGAGTTCTTCGATTCTCTGGCTATTCAGgttcgcaaac ... tcaaatgcagGTCTGTACAGTGGTCTTGGATCGTTAACTTTAGGAAGAATTTCTGGTTTTG
EST: AAGCTCCTTTCAAGTTTTTAATAGAGTTCTTCGATTCTCTGGCTATTCAG GTCTGTACAGTG
genomic: AAGCTCCTTTCAAGTTTTTAATAGAGTTCTTCGATTCTCTGGCTATTCAGgttcgcaaac ... tcaaatgcagGTCTGTACAGTG
ttccaatcattttctgattctgcatcaggcataatgacatgttcttcaaatgcagGTCTGTACAGTGGTCTTGGATCGTTAACTTTAGGAAGAATTTCTGGTTTTGGTGCAAGGTTTGGTGTCTATGAGATTCTAACAGCTTTCTACAAAG
ttctgat putative branch site (score: 3)
tgttcttc putative PPT
atcatttt TA-rich tract