Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ttcttatacttgttatatatctatttgattgttggaattgtggagatatatcaaagaagattatgagaaactaaactgcatcttttatggcttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAAAGTTTGATGCTTTGGTGA

Basic information

species Arabidopsis thaliana
transcript AT3G52300.2
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AT3G52300.2 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: LOC_Os08g37320.1 (Oryza sativa), 3'ss of exon 2
-----ttcttatacttgttatatatctatttgattgttggaattgtggagatatatcaaagaagattatgagaaactaaactgcatcttttatggcttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAAAGTTTGATGCTTTGGTGA
       |  || |  ||  ||  | |  || ||| ||    ||       | | |         || |    ||  | |||     |   ||   |    ||||||||||| || || |||||||||||||  || |||||| | ||||||||||||||||||||  ||    
aattgaccccatgcaagtattacttttgcttaattcttctggtttatatagtttgttccgcctacttgtagtgaag-atactaagcatgaaataaat----gcagGCATTGAAATCCCCAAGTACGTTGACACCGTGACTCCTCAGTACAAGCCAAAGTTTGATGCGCTG----

upper sequence: AT3G52300.2 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: GRMZM2G157018_T01 (Zea mays), 3'ss of exon 2
-ttcttatacttgttatatatctatttgattgttggaattgtggagatatatcaaagaagattatgagaaactaaactgcatcttttatggcttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAAAGTTTGATGCTTTGGTGA
 |||  ||  |  || |   ||  | ||  ||      || |  | |||  ||        || |          |     |    |     |   ||||||||| ||||| || |||||||| |||| |||||||||  | ||||||||||||||||||||| ||    
cttcacatgatgattgttggtcc-tgtgtatgccatttttttctatataattctgttctctttgtccactttctgaggtagtaaacttgaaataaatgcagGCATCGAGATCCCGAAGTACGTCGACACAGTTACTCCCCAGTACAAGCCAAAGTTTGATGCTGTG----
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86024139|gb|DR319892.1|DR319892
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024137|gb|DR319890.1|DR319890
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024117|gb|DR319870.1|DR319870
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|124836268|gb|EH920707.1|EH920707
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAA
EST: gi|301502222|gb|HO207762.1|HO207762
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024141|gb|DR319894.1|DR319894
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86078461|gb|DR374218.1|DR374218
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024106|gb|DR319859.1|DR319859
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|124791275|gb|EH880954.1|EH880954
EST:     CATTGTTGACAAGTACAAGGAAGCTTATTGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCA
genomic: CATTGTTGACAAGTACAAGGAAGCTTA-TGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCA
EST: gi|86024101|gb|DR319854.1|DR319854
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|124804620|gb|EH892315.1|EH892315
EST:     TGTTGACAAGTACAAGGAAGCTTATGACTA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCA
genomic: TGTTGACAAGTACAAGGAAGCTTATGAC-Agtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCA
EST: gi|86024104|gb|DR319857.1|DR319857
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024112|gb|DR319865.1|DR319865
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024116|gb|DR319869.1|DR319869
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024099|gb|DR319852.1|DR319852
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86078506|gb|DR374263.1|DR374263
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024120|gb|DR319873.1|DR319873
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024119|gb|DR319872.1|DR319872
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86082095|gb|DR377854.1|DR377854
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|125028388|gb|EL100657.1|EL100657
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACT
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACT
EST: gi|86024100|gb|DR319853.1|DR319853
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024128|gb|DR319881.1|DR319881
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024102|gb|DR319855.1|DR319855
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024155|gb|DR319908.1|DR319908
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024135|gb|DR319888.1|DR319888
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024115|gb|DR319868.1|DR319868
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024098|gb|DR319851.1|DR319851
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024105|gb|DR319858.1|DR319858
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024131|gb|DR319884.1|DR319884
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024145|gb|DR319898.1|DR319898
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024151|gb|DR319904.1|DR319904
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024134|gb|DR319887.1|DR319887
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCA
EST: gi|86024150|gb|DR319903.1|DR319903
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024152|gb|DR319905.1|DR319905
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|125321717|gb|EL335802.1|EL335802
EST:     GAAGGGTNTTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCC
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATT-CCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCC
EST: gi|86024148|gb|DR319901.1|DR319901
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024136|gb|DR319889.1|DR319889
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024113|gb|DR319866.1|DR319866
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024107|gb|DR319860.1|DR319860
EST:     GAAGGGTATTGGAGCTGNNNTTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCCAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024154|gb|DR319907.1|DR319907
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024122|gb|DR319875.1|DR319875
EST:     AAGGGTATTGGAGGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: AAGGGTATTGGAG-CTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024140|gb|DR319893.1|DR319893
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|164058238|gb|ES013449.1|ES013449
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAG
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAG
EST: gi|86024127|gb|DR319880.1|DR319880
EST:     GAAGGGTATTGGWGCTGGCATTGTTGACAAGTACAAGGAAGCTTANGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|125106687|gb|EL160076.1|EL160076
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACT
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACT
EST: gi|86024121|gb|DR319874.1|DR319874
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024149|gb|DR319902.1|DR319902
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024144|gb|DR319897.1|DR319897
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024109|gb|DR319862.1|DR319862
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024142|gb|DR319895.1|DR319895
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024103|gb|DR319856.1|DR319856
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024133|gb|DR319886.1|DR319886
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024111|gb|DR319864.1|DR319864
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024129|gb|DR319882.1|DR319882
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
EST: gi|86024114|gb|DR319867.1|DR319867
EST:     GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACA                         GCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA
genomic: GAAGGGTATTGGAGCTGGCATTGTTGACAAGTACAAGGAAGCTTATGACAgtaagtttta ... cttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

atatatcaaagaagattatgagaaactaaactgcatcttttatggcttgctgcagGCATTGAGATTCCAAAGTACGTTGACAAAGTTACTCCTGAATACAAGCCAAAGTTTGATGCTTTGGTGA
                       aactaaa  putative branch site (score: 2)
                                  atcttttat  TA-rich tract