1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...cttgtatctcctttgtttagatagtgatttttttgtgctttcttttttccacttcaacaattgatattgttccatttttccatctttttgtaactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGCTGGGGATGTC
species | Arabidopsis thaliana |
transcript | AT1G08110.3 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|86058484|gb|DR354241.1|DR354241
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|86058487|gb|DR354244.1|DR354244
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|152035076|gb|BP843687.2|BP843687
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTAAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|86042017|gb|DR337772.1|DR337772
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|86058483|gb|DR354240.1|DR354240
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|86042021|gb|DR337776.1|DR337776
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|86058480|gb|DR354237.1|DR354237
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|86058481|gb|DR354238.1|DR354238
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|125203116|gb|EL218070.1|EL218070
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: CAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|86058489|gb|DR354246.1|DR354246
genomic: CAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|86058490|gb|DR354247.1|DR354247
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|301501106|gb|HO206646.1|HO206646
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|116447692|gb|EG490284.1|EG490284
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|116447716|gb|EG490308.1|EG490308
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|86058479|gb|DR354236.1|DR354236
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|86058488|gb|DR354245.1|DR354245
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|86058485|gb|DR354242.1|DR354242
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|86058491|gb|DR354248.1|DR354248
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGEST: gi|116447688|gb|EG490280.1|EG490280
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
EST: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACT ATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
genomic: TGTCAACGAATCGAGATGAGGCTACAAAAGGATACATCATGCAACAGACTgtaagattcc ... taactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTG
tttccacttcaacaattgatattgttccatttttccatctttttgtaactctcagATGTTTCGGATCAAGGACCCTAAGGCTAGTCTTGACTTTTACTCACGTGTGCTGGGGATGTC
ttgtaac putative branch site (score: 2)
ttccatttttccatct CT-rich tract
aattgatatt TA-rich tract