Sequence
atgc intronic sequence ATGC exonic sequencegttttttttgttctctctctctctctcattcattactataaatccagcttgtttagttgtttgattgtgaagattcttcgttttaaacttgatgtatcgcatattatcatccgatttagggatttgagtatttatgtctatgttttcttttcgtatgagtagTTACAGCTCGCGATCCAGATCCATATCCAGTCATGGCGGGTGTAGTAGCAAGAATTGTGGAAAAGTTTGGTAAACGTGATATTTGGTATCGAATATCGTT
Basic information
species | Arabidopsis thaliana |
transcript | AT5G06190.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|164172923|gb|ES044522.1|ES044522EST: AATCTACTTTTGAGTTCTCTGGAGCAGCTTTGGTCTTTTCTCCCTTCAG TTACAGCTCGCGATCCAGATCC
genomic: AATCTACTTTTGAGTTCTCTGGAGCAGCTTTGGTCTTTTCTCTCTTCAGgttttttttg ... gtatgagtagTTACAGCTCGCGATCCAGATCC
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.catccgatttagggatttgagtatttatgtctatgttttcttttcgtatgagtagTTACAGCTCGCGATCCAGATCCATATCCAGTCATGGCGGGTGTAGTAGCAAGAATTGTGGAAAAGTTTGGTAAACGTGATATTTGGTATCGAATATCGTT
tgttttcttttcgt CT-rich tract
atttgagtatttat TA-rich tract