Sequence
atgc intronic sequence ATGC exonic sequencegtgagttcttcactaccacctgctttgaattcaactacaatctatctacaaaattctctagccgaaacctttcaagttttagcatgagacccttagcttcaattgtttttctcttggacactgtctaactttgattcttcttggaattgattagGAAATGGCTAAGAAAGTTGGAGAAGTTATAGAAAAATCCTGCGTAGAGAATGGGATCACAAAGGTGGCCTTTGACCGTGCAATTTACACTTACCATGGCT
Basic information
species | Arabidopsis thaliana |
transcript | AT3G17626.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|125208224|gb|EL223178.1|EL223178EST: TCAGACCATGGCCAAGGCTCTGTATCTTTTGCTCACTGGTTCTACCATT GAAATGGCTAAGAAAGTTGGAGAAGTTATAGAAAAATCCTGCGTAGAGAAT
genomic: TCAGACCATGGCCAAGGCTCTGTATCTTTTGCTCACTGGTTCTACCATTgtgagttctt ... aattgattagGAAATGGCTAAGAAAGTTGGAGAAGTTATAGAAAAATCCTGCGTAGAGAAT
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.caattgtttttctcttggacactgtctaactttgattcttcttggaattgattagGAAATGGCTAAGAAAGTTGGAGAAGTTATAGAAAAATCCTGCGTAGAGAATGGGATCACAAAGGTGGCCTTTGACCGTGCAATTTACACTTACCATGGCT
aattgatta TA-rich tract